RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 LRRC27Q9C0I9 530 aa22.52■■□□□ 1.2
COL9A2-211ENST00000496215 C11orf16Q9NQ32 467 aa22.52■■□□□ 1.2
COL9A2-211ENST00000496215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL9A2-211ENST00000496215 FAM13BQ9NYF5 915 aa22.52■■□□□ 1.2
COL9A2-211ENST00000496215 PCDHA7Q9UN72 937 aa22.52■■□□□ 1.2
COL9A2-211ENST00000496215 SPDYE4A6NLX3 237 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 TEX28O15482 410 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 CLTAP09496 248 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 GPR65Q8IYL9 337 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 IQUBQ8NA54 791 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 RIN2Q8WYP3 895 aaPredicted RBP22.51■■□□□ 1.19
COL9A2-211ENST00000496215 ZMAT2Q96NC0 199 aaKnown RBP22.51■■□□□ 1.19
COL9A2-211ENST00000496215 MSTO1Q9BUK6 570 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 RXFP1Q9HBX9 757 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 OLFML3Q9NRN5 406 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 VWA8A3KMH1 1905 aa22.51■■□□□ 1.19
COL9A2-211ENST00000496215 FRMD3A2A2Y4 597 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 PI4K2BG5E9Z4 385 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 OGTO15294 1046 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 B3GAT3O94766 335 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 ITIH3Q06033 890 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 PPP2R3AQ06190 1150 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 SOX4Q06945 474 aaPredicted RBP22.5■■□□□ 1.19
COL9A2-211ENST00000496215 CBX2Q14781 532 aaPredicted RBP22.5■■□□□ 1.19
COL9A2-211ENST00000496215 UPP1Q16831 310 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 HERC4Q5GLZ8 1057 aaPredicted RBP22.5■■□□□ 1.19
COL9A2-211ENST00000496215 RTP2Q5QGT7 225 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 FAM171A1Q5VUB5 890 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 CES5AQ6NT32 575 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 SLC39A4Q6P5W5 647 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 ZNF720Q7Z2F6 126 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 C12orf76Q8N812 135 aaPredicted RBP22.5■■□□□ 1.19
COL9A2-211ENST00000496215 FBXL18Q96ME1 805 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 TTPALQ9BTX7 342 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 SFXN1Q9H9B4 322 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 MAGEF1Q9HAY2 307 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 PANK4Q9NVE7 773 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 TBC1D7Q9P0N9 293 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 ZDHHC9Q9Y397 364 aa22.5■■□□□ 1.19
COL9A2-211ENST00000496215 A0A0B4J269 797 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 LOC730098B7Z3J9 87 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 PODXLO00592 558 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 FAM189A1O60320 539 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 PPP1R37O75864 691 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 GCNT3O95395 438 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 GLUD1P00367 558 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 WEE2P0C1S8 567 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 TNFSF9P41273 254 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 KRT85P78386 507 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 ALCAMQ13740 583 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 SLC10A6Q3KNW5 377 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 RARS2Q5T160 578 aaKnown RBP22.49■■□□□ 1.19
COL9A2-211ENST00000496215 RESP18Q5W5W9 173 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 ELMSAN1Q6PJG2 1045 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 DCLRE1AQ6PJP8 1040 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.49■■□□□ 1.19
COL9A2-211ENST00000496215 CEP57Q86XR8 500 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 CCDC65Q8IXS2 484 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 STAMQ92783 540 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 DDX27Q96GQ7 796 aaKnown RBP22.49■■□□□ 1.19
COL9A2-211ENST00000496215 PLEKHA5Q9HAU0 1116 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 KBTBD4Q9NVX7 518 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 FNIP2Q9P278 1114 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 RCOR1Q9UKL0 485 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 EXOC7Q9UPT5 735 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 ATP6V1DQ9Y5K8 247 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 DENND4AQ7Z401 1863 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 C2orf16Q68DN1 1984 aa22.49■■□□□ 1.19
COL9A2-211ENST00000496215 AMPD3Q01432 767 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 ZBTB41Q5SVQ8 909 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 L1TD1Q5T7N2 865 aaKnown RBP22.48■■□□□ 1.19
COL9A2-211ENST00000496215 PDXDC1Q6P996 788 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 PRSS55Q6UWB4 352 aaPredicted RBP22.48■■□□□ 1.19
COL9A2-211ENST00000496215 C3orf58Q8NDZ4 430 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 PIK3R5Q8WYR1 880 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 C18orf25Q96B23 403 aaPredicted RBP22.48■■□□□ 1.19
COL9A2-211ENST00000496215 SPATA32Q96LK8 384 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 PYM1Q9BRP8 204 aaKnown RBP22.48■■□□□ 1.19
COL9A2-211ENST00000496215 PHF7Q9BWX1 381 aaPredicted RBP22.48■■□□□ 1.19
COL9A2-211ENST00000496215 TRIM9Q9C026 710 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 ADAM7Q9H2U9 754 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 MAN1C1Q9NR34 630 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 DPP7Q9UHL4 492 aa22.48■■□□□ 1.19
COL9A2-211ENST00000496215 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.48■■□□□ 1.19
COL9A2-211ENST00000496215 TTC26A0AVF1 554 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 TISP43B9A030 160 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 ANKRD63C9JTQ0 380 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 POLR2DO15514 142 aaKnown RBP22.47■■□□□ 1.19
COL9A2-211ENST00000496215 TRAPPC3O43617 180 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 ENOX2Q16206 610 aaKnown RBP22.47■■□□□ 1.19
COL9A2-211ENST00000496215 PSMD5Q16401 504 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 SLFN12LQ6IEE8 588 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 CD300LGQ6UXG3 332 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 GLYCTKQ8IVS8 523 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 RIPOR3Q96MK2 946 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 NECTIN4Q96NY8 510 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 ACCSQ96QU6 501 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 STRA6Q9BX79 667 aa22.47■■□□□ 1.19
COL9A2-211ENST00000496215 RPF1Q9H9Y2 349 aaKnown RBP22.47■■□□□ 1.19
COL9A2-211ENST00000496215 TUBGCP4Q9UGJ1 667 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms