RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 FAN1Q9Y2M0 1017 aa12.72□□□□□ -0.37
UBA3-211ENST00000493957 STYXL1Q9Y6J8 313 aa12.72□□□□□ -0.37
UBA3-211ENST00000493957 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
UBA3-211ENST00000493957 DOCK6Q96HP0 2047 aa12.72□□□□□ -0.37
UBA3-211ENST00000493957 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
UBA3-211ENST00000493957 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 PVALEFA0A1B0GWK0 134 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 GOLGA6L4A6NEF3 574 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 HIDE1A8MVS5 230 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 OGTO15294 1046 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 LINC01565O15544 149 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 NR1I2O75469 434 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 KIF4AO95239 1232 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 RPN1P04843 607 aaKnown RBP12.71□□□□□ -0.37
UBA3-211ENST00000493957 THP07101 528 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 SCP2P22307 547 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 YARSP54577 528 aaKnown RBP12.71□□□□□ -0.37
UBA3-211ENST00000493957 WNT7BP56706 349 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
UBA3-211ENST00000493957 UBE3AQ05086 875 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 HYAL1Q12794 435 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 DPYDQ12882 1025 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 TUSC3Q13454 348 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
UBA3-211ENST00000493957 TIGD5Q53EQ6 642 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 CRELD2Q6UXH1 353 aaPredicted RBP12.71□□□□□ -0.37
UBA3-211ENST00000493957 KIAA0895Q8NCT3 520 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 SCFD1Q8WVM8 642 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 ERCC4Q92889 916 aaPredicted RBP12.71□□□□□ -0.37
UBA3-211ENST00000493957 SAAL1Q96ER3 474 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 B3GALT6Q96L58 329 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 IPO9Q96P70 1041 aaKnown RBP12.71□□□□□ -0.37
UBA3-211ENST00000493957 TCF25Q9BQ70 676 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 CBWD1Q9BRT8 395 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 ZBP1Q9H171 429 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 PCIF1Q9H4Z3 704 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 CNTN3Q9P232 1028 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 TUBGCP4Q9UGJ1 667 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 LZTS1Q9Y250 596 aa12.71□□□□□ -0.37
UBA3-211ENST00000493957 TTC26A0AVF1 554 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 GOLGA8IPA6NC78 632 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 GOLGA8JA6NMD2 632 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 LACTBL1A8MY62 500 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 PER2O15055 1255 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 EFEMP2O95967 443 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 ALDH2P05091 517 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 CLTAP09496 248 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 GUCY2FP51841 1108 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 TFF2Q03403 129 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 KRT17Q04695 432 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 FAM160A1Q05DH4 1040 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 STK4Q13043 487 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 PNOCQ13519 176 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 CD300LGQ6UXG3 332 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 DDX53Q86TM3 631 aaKnown RBP12.7□□□□□ -0.38
UBA3-211ENST00000493957 RBM23Q86U06 439 aaKnown RBP12.7□□□□□ -0.38
UBA3-211ENST00000493957 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 VPS52Q8N1B4 723 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 C3orf58Q8NDZ4 430 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 POMGNT1Q8WZA1 660 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 FAM84AQ96KN4 292 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 GPR62Q9BZJ7 368 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 ENTPD7Q9NQZ7 604 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 TOPORSQ9NS56 1045 aaPredicted RBP12.7□□□□□ -0.38
UBA3-211ENST00000493957 EXOC1Q9NV70 894 aa12.7□□□□□ -0.38
UBA3-211ENST00000493957 CPSF3Q9UKF6 684 aaKnown RBP12.7□□□□□ -0.38
UBA3-211ENST00000493957 AGO2Q9UKV8 859 aaKnown RBP12.7□□□□□ -0.38
UBA3-211ENST00000493957 EIF3DO15371 548 aaKnown RBP eCLIP12.69□□□□□ -0.38
UBA3-211ENST00000493957 TGFB1I1O43294 461 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 NFICP08651 508 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 KCNE1P15382 129 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 ABCD1P33897 745 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 NRIP1P48552 1158 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 CLCNKBP51801 687 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 ALCAMQ13740 583 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 HSP90AA2PQ14568 343 aaPredicted RBP12.69□□□□□ -0.38
UBA3-211ENST00000493957 POSTNQ15063 836 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 TMC7Q7Z402 723 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 RNF168Q8IYW5 571 aaPredicted RBP12.69□□□□□ -0.38
UBA3-211ENST00000493957 VN1R2Q8NFZ6 395 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 FAM213AQ9BRX8 229 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
UBA3-211ENST00000493957 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
UBA3-211ENST00000493957 C2orf71A6NGG8 1288 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 PPEF2O14830 753 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 CLIC2O15247 247 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 GLP2RO95838 553 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 CA8P35219 290 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 DLX2Q07687 328 aaPredicted RBP12.68□□□□□ -0.38
UBA3-211ENST00000493957 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 SCARA3Q6AZY7 606 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 JADE1Q6IE81 842 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 SLFN12LQ6IEE8 588 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 ARMCX5Q6P1M9 558 aa12.68□□□□□ -0.38
UBA3-211ENST00000493957 FUT10Q6P4F1 479 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms