RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 MXD4Q14582 209 aaPredicted RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 RABEP1Q15276 862 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 EEF1DP3Q658K8 133 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 MCTP1Q6DN14 999 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 GLB1LQ6UWU2 654 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 TMEM184AQ6ZMB5 413 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 ZBTB33Q86T24 672 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 EXOC8Q8IYI6 725 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 COLGALT2Q8IYK4 626 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 LRRC15Q8TF66 581 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 SLC22A17Q8WUG5 538 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 SUSD6Q92537 303 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 PGBD4Q96DM1 585 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 RPGRIP1Q96KN7 1286 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 PNMA5Q96PV4 448 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 PAAF1Q9BRP4 392 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 CSRNP2Q9H175 543 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 SMOC2Q9H3U7 446 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 FZD8Q9H461 694 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 NGRNQ9NPE2 291 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 MARCH5Q9NX47 278 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 LRWD1Q9UFC0 647 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 DBR1Q9UK59 544 aaKnown RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 FAN1Q9Y2M0 1017 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 PRG3Q9Y2Y8 225 aaPredicted RBP8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 HCFC2Q9Y5Z7 792 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 MYO10Q9HD67 2058 aa8.1□□□□□ -1.11
PRPF4B-208ENST00000490653 KMT2EQ8IZD2 1858 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 A0A1B0GUA9 196 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 ARL5CA6NH57 179 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 GAS2O43903 313 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 ERLIN2O94905 339 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 IGHA1P01876 353 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 CTSAP10619 480 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 MLH1P40692 756 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 OR1G1P47890 313 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 RAB27AP51159 221 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 GRIN1Q05586 938 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 TFDP1Q14186 410 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 SMC1AQ14683 1233 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 NT5DC1Q5TFE4 455 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 PDE12Q6L8Q7 609 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 ASCL5Q7RTU5 278 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 DDX53Q86TM3 631 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 DAW1Q8N136 415 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 TMEM130Q8N3G9 435 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 PPP2R3CQ969Q6 453 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 TMEM169Q96HH4 297 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 B3GALT6Q96L58 329 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 TBC1D32Q96NH3 1257 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 KLHL5Q96PQ7 755 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 MRPL9Q9BYD2 267 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 BHMT2Q9H2M3 363 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 DDX19AQ9NUU7 478 aaKnown RBP8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 SNTG2Q9NY99 539 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
PRPF4B-208ENST00000490653 NPHP3-ACAD11A0A0J9YXS1 232 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 ARHGEF35A5YM69 484 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 C2CD2LO14523 706 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 EFEMP2O95967 443 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 CNPP09543 421 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 AXLP30530 894 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PPM1AP35813 382 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 TRAPPC10P48553 1259 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PDIA5Q14554 519 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PTPN14Q15678 1187 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 ZRSR1Q15695 479 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 RARS2Q5T160 578 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 NOTUMQ6P988 496 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 TAS1R3Q7RTX0 852 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 IGSF22Q8N9C0 903 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 URGCPQ8TCY9 931 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 SNX29Q8TEQ0 813 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PBXIP1Q96AQ6 731 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 MFSD14AQ96MC6 490 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 CCDC43Q96MW1 224 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 FAM193BQ96PV7 902 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 CDCA3Q99618 268 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 RUSC1Q9BVN2 902 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PHF7Q9BWX1 381 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 GPR62Q9BZJ7 368 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 CCDC113Q9H0I3 377 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PDZD7Q9H5P4 517 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 NOL7Q9UMY1 257 aaKnown RBP8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 GPSM3Q9Y4H4 160 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PLXNA3P51805 1871 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 DNAH14Q0VDD8 3507 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 TRIP11Q15643 1979 aa8.08□□□□□ -1.12
PRPF4B-208ENST00000490653 PTGESO14684 152 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 INPPL1O15357 1258 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 PRKCBP05771 671 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 SPATA31D3P0C874 917 aa8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 RPL17P18621 184 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-208ENST00000490653 MARSP56192 900 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms