RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 TMEM206Q9H813 350 aa8.56□□□□□ -1.04
SSR1-210ENST00000489567 TOPORSQ9NS56 1045 aaPredicted RBP8.56□□□□□ -1.04
SSR1-210ENST00000489567 MAPK8IP1Q9UQF2 711 aa8.56□□□□□ -1.04
SSR1-210ENST00000489567 FAN1Q9Y2M0 1017 aa8.56□□□□□ -1.04
SSR1-210ENST00000489567 PRRC2BQ5JSZ5 2229 aaKnown RBP8.56□□□□□ -1.04
SSR1-210ENST00000489567 TRIP11Q15643 1979 aa8.56□□□□□ -1.04
SSR1-210ENST00000489567 CLIC2O15247 247 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
SSR1-210ENST00000489567 ADRB2P07550 413 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 KCNE1P15382 129 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 PPM1AP35813 382 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 PSMD2Q13200 908 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 TUSC3Q13454 348 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 KCNB1Q14721 858 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 KNOP1Q1ED39 458 aaKnown RBP8.55□□□□□ -1.04
SSR1-210ENST00000489567 ARMCX5Q6P1M9 558 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 TAS1R1Q7RTX1 841 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 ADGRD2Q7Z7M1 963 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 C3orf58Q8NDZ4 430 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 MAFAQ8NHW3 353 aaPredicted RBP8.55□□□□□ -1.04
SSR1-210ENST00000489567 HASPINQ8TF76 798 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 FAM212AQ96EL1 285 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 FAM84AQ96KN4 292 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 FAM213AQ9BRX8 229 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 KCTD10Q9H3F6 313 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 RPF1Q9H9Y2 349 aaKnown RBP8.55□□□□□ -1.04
SSR1-210ENST00000489567 AGPAT3Q9NRZ7 376 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 TUBGCP4Q9UGJ1 667 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 UBE4BO95155 1302 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 KIF4AO95239 1232 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 EFEMP2O95967 443 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 NFICP08651 508 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 GARTP22102 1010 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 GTF2F1P35269 517 aaKnown RBP eCLIP8.55□□□□□ -1.04
SSR1-210ENST00000489567 CLCNKBP51801 687 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 ZBTB6Q15916 424 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 CAMK4Q16566 473 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 ISM2Q6H9L7 571 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 JADE1Q6IE81 842 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 CD300LGQ6UXG3 332 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 AUTS2Q8WXX7 1259 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 TMEM169Q96HH4 297 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 B3GALT6Q96L58 329 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 GPR62Q9BZJ7 368 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 PLEKHA5Q9HAU0 1116 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 PRDM6Q9NQX0 595 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 TLR9Q9NR96 1032 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 HSPBP1Q9NZL4 362 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 LMCD1Q9NZU5 365 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 LZTS1Q9Y250 596 aa8.55□□□□□ -1.04
SSR1-210ENST00000489567 CITO14578 2027 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 HIDE1A8MVS5 230 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 FSCN2O14926 492 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 SLC34A2O95436 690 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 BMP6P22004 513 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 CYP2J2P51589 502 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 KRT17Q04695 432 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 UBE3AQ05086 875 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 HSP90AA2PQ14568 343 aaPredicted RBP8.54□□□□□ -1.04
SSR1-210ENST00000489567 PTPROQ16827 1216 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 UPP1Q16831 310 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 TCEAL5Q5H9L2 206 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 PLPP4Q5VZY2 271 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 SCARA3Q6AZY7 606 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 DDX53Q86TM3 631 aaKnown RBP8.54□□□□□ -1.04
SSR1-210ENST00000489567 CBWD2Q8IUF1 395 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 EFCAB13Q8IY85 973 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 ELOA2Q8IYF1 753 aaPredicted RBP8.54□□□□□ -1.04
SSR1-210ENST00000489567 RNF168Q8IYW5 571 aaPredicted RBP8.54□□□□□ -1.04
SSR1-210ENST00000489567 VPS52Q8N1B4 723 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 NOC3LQ8WTT2 800 aaKnown RBP8.54□□□□□ -1.04
SSR1-210ENST00000489567 SMARCE1Q969G3 411 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 GSDMAQ96QA5 445 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 TCF25Q9BQ70 676 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 LMAN2LQ9H0V9 348 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 ZBP1Q9H171 429 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 MAN1B1Q9UKM7 699 aa8.54□□□□□ -1.04
SSR1-210ENST00000489567 EXTL3O43909 919 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 PRCPP42785 496 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 KYAT1Q16773 422 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 HS2ST1Q7LGA3 356 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 BRSK2Q8IWQ3 736 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 GPD1LQ8N335 351 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 RDH13Q8NBN7 331 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 GPT2Q8TD30 523 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 MICAL1Q8TDZ2 1067 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 CCDC47Q96A33 483 aaKnown RBP8.53□□□□□ -1.04
SSR1-210ENST00000489567 CCDC34Q96HJ3 373 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 FBXL18Q96ME1 805 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 GBP4Q96PP9 640 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 COLEC11Q9BWP8 271 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 PUF60Q9UHX1 559 aaKnown RBP8.53□□□□□ -1.04
SSR1-210ENST00000489567 ADAM28Q9UKQ2 775 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 MYO7AQ13402 2215 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 SPTBN5Q9NRC6 3674 aaKnown RBP8.53□□□□□ -1.04
SSR1-210ENST00000489567 ANK1P16157 1881 aa8.53□□□□□ -1.04
SSR1-210ENST00000489567 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms