RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 ZNF747Q9BV97 191 aa5.29□□□□□ -1.56
TTC3-220ENST00000487711 THRAP3Q9Y2W1 955 aaKnown RBP5.29□□□□□ -1.56
TTC3-220ENST00000487711 REXO2Q9Y3B8 237 aaKnown RBP5.29□□□□□ -1.56
TTC3-220ENST00000487711 ITGB1P05556 798 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 POU2F2P09086 479 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 ALAS1P13196 640 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 AKAP5P24588 427 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 PTTG1IPP53801 180 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 ZNF280AP59817 542 aaPredicted RBP5.28□□□□□ -1.56
TTC3-220ENST00000487711 SLC25A3Q00325 362 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 UBXN2BQ14CS0 331 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 USP45Q70EL2 814 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 GDF7Q7Z4P5 450 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 ZNF276Q8N554 614 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 NSUN6Q8TEA1 469 aaKnown RBP5.28□□□□□ -1.56
TTC3-220ENST00000487711 SLC25A43Q8WUT9 341 aaPredicted RBP5.28□□□□□ -1.56
TTC3-220ENST00000487711 JDP2Q8WYK2 163 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 MRGPRX4Q96LA9 322 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 RTFDC1Q9BY42 306 aaPredicted RBP5.28□□□□□ -1.56
TTC3-220ENST00000487711 RHOBTB2Q9BYZ6 727 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 REXO4Q9GZR2 422 aaKnown RBP5.28□□□□□ -1.56
TTC3-220ENST00000487711 MAN1C1Q9NR34 630 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 FBXO34Q9NWN3 711 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 ZIM2Q9NZV7 527 aa5.28□□□□□ -1.56
TTC3-220ENST00000487711 USP15Q9Y4E8 981 aaPredicted RBP5.28□□□□□ -1.56
TTC3-220ENST00000487711 DIRC3C9JPN6 131 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 NPIPB8E9PQR5 432 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 RPS6KA4O75676 772 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 SPATA31D3P0C874 917 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 TACR2P21452 398 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 SLC6A2P23975 617 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 DSC2Q02487 901 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 DACT2Q5SW24 774 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 IFIT1BQ5T764 474 aaKnown RBP5.27□□□□□ -1.57
TTC3-220ENST00000487711 THEMIS2Q5TEJ8 643 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 SPATA31D4Q6ZUB0 917 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 RAVER1Q8IY67 606 aaKnown RBP5.27□□□□□ -1.57
TTC3-220ENST00000487711 PRR18Q8N4B5 295 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 DCBLD1Q8N8Z6 715 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 VRK1Q99986 396 aaPredicted RBP5.27□□□□□ -1.57
TTC3-220ENST00000487711 GTPBP4Q9BZE4 634 aaKnown RBP5.27□□□□□ -1.57
TTC3-220ENST00000487711 CDH19Q9H159 772 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 CALCOCO1Q9P1Z2 691 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 G3BP2Q9UN86 482 aaKnown RBP5.27□□□□□ -1.57
TTC3-220ENST00000487711 ATP11BQ9Y2G3 1177 aa5.27□□□□□ -1.57
TTC3-220ENST00000487711 LRRC14BA6NHZ5 514 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 AHRRA9YTQ3 701 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 ZNF185O15231 689 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 GRM6O15303 877 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 OFD1O75665 1012 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 PEX11BO96011 259 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 CD1AP06126 327 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 MTHFD1P11586 935 aaKnown RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 C6P13671 934 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 SMARCA1P28370 1054 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 CYP2C19P33261 490 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 TLE1Q04724 770 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 PGS1Q32NB8 556 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 KHDC1Q4VXA5 237 aaKnown RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 PABPC1LQ4VXU2 614 aaKnown RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 PDCD4Q53EL6 469 aaKnown RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 FAM102AQ5T9C2 384 aaPredicted RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 TSHZ3Q63HK5 1081 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 CRIP3Q6Q6R5 217 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 GRAMD1CQ8IYS0 662 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 SYNE4Q8N205 404 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 FITM2Q8N6M3 262 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 C3orf20Q8ND61 904 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 NLGN4YQ8NFZ3 816 aaPredicted RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 RGMAQ96B86 450 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 LRGUKQ96M69 825 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 CAMKK2Q96RR4 588 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 MAP3K14Q99558 947 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 SLC46A2Q9BY10 475 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 PACSIN1Q9BY11 444 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 GSTO2Q9H4Y5 243 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 ZNF768Q9H5H4 540 aaKnown RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 NRDE2Q9H7Z3 1164 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 SLC2A4RGQ9NR83 387 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 FAM30AQ9NZY2 134 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 TCEAL9Q9UHQ7 104 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 PNMA8BQ9ULN7 279 aaPredicted RBP5.26□□□□□ -1.57
TTC3-220ENST00000487711 POLHQ9Y253 713 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 CHST2Q9Y4C5 530 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 EID1Q9Y6B2 187 aa5.26□□□□□ -1.57
TTC3-220ENST00000487711 CDHR4A6H8M9 788 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 RNASET2O00584 256 aaKnown RBP5.25□□□□□ -1.57
TTC3-220ENST00000487711 ZNF202O95125 648 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 FTLP02792 175 aaPredicted RBP5.25□□□□□ -1.57
TTC3-220ENST00000487711 PTGS2P35354 604 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 FXR1P51114 621 aaKnown RBP eCLIP5.25□□□□□ -1.572e-6■■■■□ 21.8
TTC3-220ENST00000487711 FAM189BP81408 668 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 ZXDAP98168 799 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 PPP2R5AQ15172 486 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 CCDC157Q569K6 752 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 AGAP9Q5VTM2 703 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 TPH2Q8IWU9 490 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 RHOT2Q8IXI1 618 aa5.25□□□□□ -1.57
TTC3-220ENST00000487711 OR56A1Q8NGH5 318 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms