RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 KCNK9Q9NPC2 374 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 A0A087WZ62 844 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 FKTNO75072 461 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 CASC4Q6P4E1 433 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 KCNK18Q7Z418 384 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 FDXACB1Q9BRP7 624 aaPredicted RBP20.5■□□□□ 0.87
CCM2-214ENST00000481194 SETD4Q9NVD3 440 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 VPS18Q9P253 973 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 TMEM253P0C7T8 217 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 ADORA2BP29275 332 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 TADA2BQ86TJ2 420 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 PPTC7Q8NI37 304 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 PODXLO00592 558 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 GUCY2DQ02846 1103 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 SEPT8Q92599 483 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 CYP3A43Q9HB55 503 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 NGRNQ9NPE2 291 aaKnown RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 PRDM5Q9NQX1 630 aaPredicted RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 ITGA11Q9UKX5 1188 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 IRS2Q9Y4H2 1338 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 TADA2AO75478 443 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 MRPS9P82933 396 aaKnown RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 MAPRE1Q15691 268 aaKnown RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 SPATA2LQ8IUW3 424 aaPredicted RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 C18orf8Q96DM3 657 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 MYH2Q9UKX2 1941 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 UAP1Q16222 522 aaPredicted RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 ADAT2Q7Z6V5 191 aaKnown RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 CEP57Q86XR8 500 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 MED15Q96RN5 788 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 DPH5Q9H2P9 285 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 ASB7Q9H672 318 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 SEPT10Q9P0V9 454 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 CPSF3Q9UKF6 684 aaKnown RBP20.49■□□□□ 0.87
CCM2-214ENST00000481194 PLAGL2Q9UPG8 496 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 TRPV2Q9Y5S1 764 aa20.49■□□□□ 0.87
CCM2-214ENST00000481194 GTF2BQ00403 316 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 CUL1Q13616 776 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 AFAP1L1Q8TED9 768 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 KIZQ2M2Z5 673 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 PHF20L1A8MW92 1017 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 AKAP3O75969 853 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 HEXIM1O94992 359 aaKnown RBP20.48■□□□□ 0.87
CCM2-214ENST00000481194 DARS2Q6PI48 645 aaKnown RBP20.48■□□□□ 0.87
CCM2-214ENST00000481194 SCN4BQ8IWT1 228 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 SPATA31C1P0DKV0 1188 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 MBOAT7Q96N66 472 aa20.48■□□□□ 0.87
CCM2-214ENST00000481194 PFDN6O15212 129 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 ODC1P11926 461 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 CTNNA1P35221 906 aaKnown RBP20.47■□□□□ 0.87
CCM2-214ENST00000481194 VEPH1Q14D04 833 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 SLC27A1Q6PCB7 646 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 ANKS4BQ8N8V4 417 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 IPO11Q9UI26 975 aaKnown RBP20.47■□□□□ 0.87
CCM2-214ENST00000481194 FARP2O94887 1054 aaPredicted RBP20.47■□□□□ 0.87
CCM2-214ENST00000481194 DR1Q01658 176 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 BMT2Q1RMZ1 405 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 FAM102AQ5T9C2 384 aaPredicted RBP20.47■□□□□ 0.87
CCM2-214ENST00000481194 C4orf50Q6ZRC1 276 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 DNAJC19Q96DA6 116 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 TTLL3Q9Y4R7 772 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 PSMD6Q15008 389 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 PHLDB2Q86SQ0 1253 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 ZWILCHQ9H900 591 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 NAV1Q8NEY1 1877 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 ITGB3P05106 788 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 CPB1P15086 417 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 ZFXP17010 805 aaPredicted RBP20.47■□□□□ 0.87
CCM2-214ENST00000481194 ITGB3BPQ13352 177 aaPredicted RBP20.47■□□□□ 0.87
CCM2-214ENST00000481194 ZCCHC17Q9NP64 241 aaKnown RBP20.47■□□□□ 0.87
CCM2-214ENST00000481194 SAMD15Q9P1V8 674 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 DSEQ9UL01 958 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 ZMYM2Q9UBW7 1377 aa20.47■□□□□ 0.87
CCM2-214ENST00000481194 GOLGA8KD6RF30 607 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 KLRC4O43908 158 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 DUSP28Q4G0W2 176 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 MMTAG2Q9BU76 263 aaKnown RBP20.46■□□□□ 0.87
CCM2-214ENST00000481194 COLEC11Q9BWP8 271 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 WNK3Q9BYP7 1800 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 FGGP02679 453 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 RALAP11233 206 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 CASP4P49662 377 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 PLCB4Q15147 1175 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 BTBD7Q9P203 1132 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.46■□□□□ 0.87
CCM2-214ENST00000481194 TRPA1O75762 1119 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 SNX17Q15036 470 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 ARHGEF18Q6ZSZ5 1173 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 RUBCNQ92622 972 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 PPANQ9NQ55 473 aaKnown RBP20.46■□□□□ 0.87
CCM2-214ENST00000481194 C2orf54Q08AI8 447 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 SLMAPQ14BN4 828 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 ABHD15Q6UXT9 468 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 SLC9A9Q8IVB4 645 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 BRSK2Q8IWQ3 736 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 WHAMMQ8TF30 809 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 HSPH1Q92598 858 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 DDX27Q96GQ7 796 aaKnown RBP20.46■□□□□ 0.87
CCM2-214ENST00000481194 OSBPL9Q96SU4 736 aa20.46■□□□□ 0.87
CCM2-214ENST00000481194 CHP1Q99653 195 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms