RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	PTPN7	P35236	360 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	ZNF81	P51508	661 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	MEF2A	Q02078	507 aa	Predicted RBP	4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	GIMAP6	Q6P9H5	292 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	SH2D3C	Q8N5H7	860 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	TGFBRAP1	Q8WUH2	860 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	ZNF480	Q8WV37	535 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	ANKS1A	Q92625	1134 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	VTA1	Q9NP79	307 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	TBCCD1	Q9NVR7	557 aa		4.58	□□□□□ -1.68
CCNL1-223	ENST00000481173	AATK	Q6ZMQ8	1374 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	PNPLA7	Q6ZV29	1317 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173		A0A1B0GTW7	788 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	CGB1	A6NKQ9	187 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	GOLGA8A	A7E2F4	631 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	WNT10B	O00744	389 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	ZEB2	O60315	1214 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	FGFR4	P22455	802 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	ADSL	P30566	484 aa	Predicted RBP	4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	CXADR	P78310	365 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	FSCN1	Q16658	493 aa	Known RBP	4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	FAM47A	Q5JRC9	791 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	PDLIM2	Q96JY6	352 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	AIFM2	Q9BRQ8	373 aa		4.57	□□□□□ -1.68
CCNL1-223	ENST00000481173	PJA2	O43164	708 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	ULK1	O75385	1050 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	CRHR1	P34998	444 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	SCAND1	P57086	179 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	SESN3	P58005	492 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	PROK1	P58294	105 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	HSD11B2	P80365	405 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	NACC2	Q96BF6	587 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	CAAP1	Q9H8G2	361 aa		4.56	□□□□□ -1.68
CCNL1-223	ENST00000481173	RPTOR	Q8N122	1335 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	AKR1B10	O60218	316 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	SNRPA1	P09661	255 aa	Known RBP	4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	ENPP1	P22413	925 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	MASP1	P48740	699 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	TAF7L	Q5H9L4	462 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	AKNAD1	Q5T1N1	836 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	ZNF788	Q6ZQV5	615 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	LHFPL2	Q6ZUX7	228 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	C1QL2	Q7Z5L3	287 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	TRMT2A	Q8IZ69	625 aa	Known RBP	4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	ZNF366	Q8N895	744 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	C9orf106	Q8NAJ2	232 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	RIN2	Q8WYP3	895 aa	Predicted RBP	4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	FUBP1	Q96AE4	644 aa	Known RBP	4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	REXO4	Q9GZR2	422 aa	Known RBP	4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	QRSL1	Q9H0R6	528 aa	Known RBP	4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	SLK	Q9H2G2	1235 aa	Predicted RBP	4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	RNPEP	Q9H4A4	650 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	GALNT9	Q9HCQ5	603 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	SLC17A6	Q9P2U8	582 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	USP25	Q9UHP3	1055 aa		4.55	□□□□□ -1.68
CCNL1-223	ENST00000481173	WDR91	A4D1P6	747 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	GPANK1	O95872	356 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	CTGF	P29279	349 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	SOX5	P35711	763 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	MST1L	Q2TV78	715 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	SDE2	Q6IQ49	451 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	TSPEAR	Q8WU66	669 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	CHAC2	Q8WUX2	184 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	STON2	Q8WXE9	905 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	DDB2	Q92466	427 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	PTCD3	Q96EY7	689 aa	Known RBP	4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	BOD1	Q96IK1	185 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	ACAP3	Q96P50	834 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	C1QTNF7	Q9BXJ2	289 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	TMEM74B	Q9NUR3	256 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	KCTD5	Q9NXV2	234 aa		4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	APOBEC2	Q9Y235	224 aa	Known RBP	4.54	□□□□□ -1.68
CCNL1-223	ENST00000481173	ATRNL1	Q5VV63	1379 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	PROP1	O75360	226 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	PRSS23	O95084	383 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	RAP2A	P10114	183 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	ALOX15	P16050	662 aa	Predicted RBP	4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	SLC6A2	P23975	617 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	HSD3B2	P26439	372 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	TMPRSS15	P98073	1019 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	STAT4	Q14765	748 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	CYP2A13	Q16696	494 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	RRP12	Q5JTH9	1297 aa	Known RBP	4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	TOR2A	Q5JU69	321 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	GPR156	Q8NFN8	814 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	LMBR1	Q8WVP7	490 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	RAX2	Q96IS3	184 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	MRI1	Q9BV20	369 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	UNKL	Q9H9P5	680 aa	Known RBP	4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	DMRT3	Q9NQL9	472 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	KMT5A	Q9NQR1	393 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	SIK3	Q9Y2K2	1263 aa		4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	TMA7	Q9Y2S6	64 aa	Known RBP	4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	MTO1	Q9Y2Z2	717 aa	Known RBP	4.53	□□□□□ -1.68
CCNL1-223	ENST00000481173	POLR2A	P24928	1970 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms