RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 C11orf54Q9H0W9 315 aaPredicted RBP5.07□□□□□ -1.6
SMARCA1-204ENST00000478420 KMT5AQ9NQR1 393 aa5.07□□□□□ -1.6
SMARCA1-204ENST00000478420 XDHP47989 1333 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 PNPLA7Q6ZV29 1317 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 KLRG2A4D1S0 409 aaPredicted RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 GOLGA6CA6NDK9 693 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 GOLGA6BA6NDN3 693 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 PRPF3O43395 683 aaKnown RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 ARIH2O95376 493 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 PARNO95453 639 aaKnown RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 POMCP01189 267 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 FTLP02792 175 aaPredicted RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 AMHP03971 560 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 GOLGA6DP0CG33 693 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 ALAS1P13196 640 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 FXR1P51114 621 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 TLE1Q04724 770 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 ZNF267Q14586 743 aaPredicted RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 MLC1Q15049 377 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 MINDY4Q4G0A6 757 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 KHDC1Q4VXA5 237 aaKnown RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 CCDC157Q569K6 752 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 DACT2Q5SW24 774 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 WDR75Q8IWA0 830 aaKnown RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 CAMKK1Q8N5S9 505 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 C3orf20Q8ND61 904 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 SLC35G2Q8TBE7 412 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 DIS3LQ8TF46 1054 aaKnown RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 DMRTA2Q96SC8 542 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 MYOCQ99972 504 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 VRK1Q99986 396 aaPredicted RBP5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 ANLNQ9NQW6 1124 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 GOLGA6AQ9NYA3 693 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 SLC23A1Q9UHI7 598 aa5.06□□□□□ -1.6
SMARCA1-204ENST00000478420 PRRG2O14669 202 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 KIAA0391O15091 583 aaKnown RBP5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 MTHFD1P11586 935 aaKnown RBP5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 MALP21145 153 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 SMARCA1P28370 1054 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 ZNF280AP59817 542 aaPredicted RBP5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 UBXN2BQ14CS0 331 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 CDSNQ15517 529 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 USP39Q53GS9 565 aaKnown RBP5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 SPDYAQ5MJ70 313 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 UBE3BQ7Z3V4 1068 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 C1orf210Q8IVY1 113 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 DCBLD1Q8N8Z6 715 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 NLGN4YQ8NFZ3 816 aaPredicted RBP5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 NDC1Q9BTX1 674 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 CHPF2Q9P2E5 772 aa5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 EIF2B4Q9UI10 523 aaKnown RBP5.05□□□□□ -1.6
SMARCA1-204ENST00000478420 NCANO14594 1321 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 TCRBV7S2A1N4TA0A589 114 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 LRRC14BA6NHZ5 514 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 DRGXA6NNA5 263 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 GRM6O15303 877 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 RECQL4O94761 1208 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 CD1AP06126 327 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 ADRB1P08588 477 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 IL12RB1P42701 662 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 MAP2K6P52564 334 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 HK3P52790 923 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 NHLH2Q02577 135 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 NOGQ13253 232 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 CSRP2Q16527 193 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 NRN1LQ496H8 165 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 PABPC1LQ4VXU2 614 aaKnown RBP5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 B3GNT9Q6UX72 402 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 MED25Q71SY5 747 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 TMPRSS6Q8IU80 811 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 DENND1CQ8IV53 801 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 EXTL1Q92935 676 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 CDK5RAP3Q96JB5 506 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 PHACTR3Q96KR7 559 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 FAM193BQ96PV7 902 aaPredicted RBP5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 TAAR9Q96RI9 348 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 DCLRE1CQ96SD1 692 aaKnown RBP5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 GPR20Q99678 358 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 REXO4Q9GZR2 422 aaKnown RBP5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 PARPBPQ9NWS1 579 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 PCDHA3Q9Y5H8 950 aa5.04□□□□□ -1.6
SMARCA1-204ENST00000478420 H3BML4 177 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 ERC2O15083 957 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 TRIM24O15164 1050 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 CTNND1O60716 968 aaKnown RBP5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 HAUS5O94927 633 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 ALDH2P05091 517 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 FTH1P19P0C7X4 201 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 ATF3P18847 181 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 APOBEC3AP31941 199 aaPredicted RBP5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 CHN2P52757 468 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 SNAPC2Q13487 334 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 GFOD2Q3B7J2 385 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 ARHGAP29Q52LW3 1261 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 RABL3Q5HYI8 236 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 SLC4A10Q6U841 1118 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 HEATR3Q7Z4Q2 680 aa5.03□□□□□ -1.6
SMARCA1-204ENST00000478420 SYT12Q8IV01 421 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms