RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 RECQL4O94761 1208 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 SLITRK3O94933 977 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 CSRP2Q16527 193 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 PRR23CQ6ZRP0 262 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 PRR23BQ6ZRT6 265 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 NAP1L4Q99733 375 aaKnown RBP22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 BRD9Q9H8M2 597 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 ANKEF1Q9NU02 776 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 PRMT7Q9NVM4 692 aaPredicted RBP22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 BACE2Q9Y5Z0 518 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 MARCH6O60337 910 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 GRM2Q14416 872 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 CDCA2Q69YH5 1023 aaPredicted RBP22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 SLFN12Q8IYM2 578 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 CXCL16Q9H2A7 254 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 PDZD7Q9H5P4 517 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 TRPV5Q9NQA5 729 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 KCNJ14Q9UNX9 436 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 FRYQ5TBA9 3013 aa22.39■■□□□ 1.17
PDLIM1-202ENST00000477757 ARHGEF37A1IGU5 675 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 CPLX1O14810 134 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 RARRES1P49788 294 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 FAM187BQ17R55 369 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 PRSS36Q5K4E3 855 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 IRF7Q92985 503 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 DDX27Q96GQ7 796 aaKnown RBP22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 CCDC43Q96MW1 224 aaKnown RBP22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 HSD17B14Q9BPX1 270 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 EIF2AK1Q9BQI3 630 aaKnown RBP22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 SNTG2Q9NY99 539 aa22.38■■□□□ 1.17
PDLIM1-202ENST00000477757 BAHCC1Q9P281 2608 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 LRRIQ4A6NIV6 560 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 N4BP3O15049 544 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 FOXD2O60548 495 aaPredicted RBP22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 PTPN2P17706 415 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 RBM25P49756 843 aaKnown RBP22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 TOB2Q14106 344 aaPredicted RBP22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 FAM78AQ5JUQ0 283 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 ANKS3Q6ZW76 656 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 MAP4K3Q8IVH8 894 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 DDX1Q92499 740 aaKnown RBP22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 FAM3CQ92520 227 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 TRMT61BQ9BVS5 477 aaKnown RBP22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 FZD8Q9H461 694 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 ZFP14Q9HCL3 533 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 PIAS3Q9Y6X2 628 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 TICRRQ7Z2Z1 1910 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 FAM208BQ5VWN6 2430 aa22.37■■□□□ 1.17
PDLIM1-202ENST00000477757 CNOT1A5YKK6 2376 aaKnown RBP22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 TTLL13PA6NNM8 815 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 MICAL2O94851 1124 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 LRG1P02750 347 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 PSMA5P28066 241 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 TKTP29401 623 aaKnown RBP22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 SATB1Q01826 763 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 SIM2Q14190 667 aaPredicted RBP22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 ASB16Q96NS5 453 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 LMAN1LQ9HAT1 526 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 ZNF334Q9HCZ1 680 aaPredicted RBP22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 ANGPTL2Q9UKU9 493 aa22.36■■□□□ 1.17
PDLIM1-202ENST00000477757 GDF9O60383 454 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 USO1O60763 962 aaKnown RBP22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 B3GAT3O94766 335 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 BAG4O95429 457 aaKnown RBP22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 IGFBP6P24592 240 aaPredicted RBP22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 CXCL12P48061 93 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 ROR1Q01973 937 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 SLC8B1Q6J4K2 584 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 PIK3AP1Q6ZUJ8 805 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 ZBTB8OSQ8IWT0 167 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 TCEAL4Q96EI5 215 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 YTHDC1Q96MU7 727 aaKnown RBP22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 GPRC5CQ9NQ84 441 aa22.35■■□□□ 1.17
PDLIM1-202ENST00000477757 WDR27A2RRH5 827 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 NRG2O14511 850 aaPredicted RBP22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 HRO43593 1189 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 CHRNB1P11230 501 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 PSMC3P17980 439 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 PMLP29590 882 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 CNR2P34972 360 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 GAS6Q14393 721 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 CPLX2Q6PUV4 134 aaKnown RBP22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 CD300LGQ6UXG3 332 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 VITQ6UXI7 678 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 NOSTRINQ8IVI9 506 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 ZNF461Q8TAF7 563 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 DEPDC1BQ8WUY9 529 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 SMARCD2Q92925 531 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 UROC1Q96N76 676 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 PPP1R10Q96QC0 940 aaKnown RBP22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 CORO1BQ9BR76 489 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 ADPGKQ9BRR6 497 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 ATRXP46100 2492 aa22.34■■□□□ 1.17
PDLIM1-202ENST00000477757 PRRG1O14668 218 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 ZNF197O14709 1029 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 TRAPPC3O43617 180 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 ABLIM3O94929 683 aa22.33■■□□□ 1.17
PDLIM1-202ENST00000477757 PAPSS2O95340 614 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms