RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 ASPMQ8IZT6 3477 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 SPAG17Q6Q759 2223 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-213ENST00000476777 MAN2B1O00754 1011 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 DGAT1O75907 488 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 SLITRK3O94933 977 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 GCFC2P16383 781 aaKnown RBP12.59□□□□□ -0.39
BRCA1-213ENST00000476777 CEBPBP17676 345 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 FGFR3P22607 806 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 FCARP24071 287 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 IGFBP6P24592 240 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-213ENST00000476777 HSPA4P34932 840 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.59□□□□□ -0.39
BRCA1-213ENST00000476777 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 TPH2Q8IWU9 490 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 CHAMP1Q96JM3 812 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 MTRRQ9UBK8 725 aa12.59□□□□□ -0.39
BRCA1-213ENST00000476777 NDRG2Q9UN36 371 aaKnown RBP12.59□□□□□ -0.39
BRCA1-213ENST00000476777 CCDC194A0A1B0GVG4 234 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-213ENST00000476777 CCNT1O60563 726 aaKnown RBP12.58□□□□□ -0.4
BRCA1-213ENST00000476777 LYPLA2O95372 231 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 THP07101 528 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 GRM2Q14416 872 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 PRR23BQ6ZRT6 265 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 PKD1L2Q7Z442 2459 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 HSD17B14Q9BPX1 270 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 POLR3FQ9H1D9 316 aaPredicted RBP12.58□□□□□ -0.4
BRCA1-213ENST00000476777 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 SEMA4GQ9NTN9 838 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 SNTG2Q9NY99 539 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 KCNJ14Q9UNX9 436 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 CDY1Q9Y6F8 540 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
BRCA1-213ENST00000476777 DSPP15924 2871 aaKnown RBP12.57□□□□□ -0.4
BRCA1-213ENST00000476777 SPEGQ15772 3267 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 ARHGEF37A1IGU5 675 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 RECQL4O94761 1208 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 CCR3P51677 355 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 CSRP2Q16527 193 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 FAM78AQ5JUQ0 283 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 PRSS36Q5K4E3 855 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 CD300LGQ6UXG3 332 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 PRR23CQ6ZRP0 262 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 SKAP1Q86WV1 359 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 MAP4K3Q8IVH8 894 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 EIF2AK1Q9BQI3 630 aaKnown RBP12.57□□□□□ -0.4
BRCA1-213ENST00000476777 FZD8Q9H461 694 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 PDZD7Q9H5P4 517 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 LMAN1LQ9HAT1 526 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 ZFP14Q9HCL3 533 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 ANKEF1Q9NU02 776 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 BACE2Q9Y5Z0 518 aa12.57□□□□□ -0.4
BRCA1-213ENST00000476777 TMEM189-UBE2V1I3L0A0 370 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 CPLX1O14810 134 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 HRO43593 1189 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 MARCH6O60337 910 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 GDF9O60383 454 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 CDC45O75419 566 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 B3GAT3O94766 335 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 PTPN2P17706 415 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 TKTP29401 623 aaKnown RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 RBM25P49756 843 aaKnown RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 RARRES1P49788 294 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 IRX6P78412 446 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 SATB1Q01826 763 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 TOB2Q14106 344 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 SIM2Q14190 667 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 FAM187BQ17R55 369 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 CDCA2Q69YH5 1023 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 SLFN12Q8IYM2 578 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 FAM3CQ92520 227 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 IRF7Q92985 503 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 TCEAL4Q96EI5 215 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 YTHDC1Q96MU7 727 aaKnown RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 ZNF334Q9HCZ1 680 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 GPRC5CQ9NQ84 441 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 TRPV5Q9NQA5 729 aa12.56□□□□□ -0.4
BRCA1-213ENST00000476777 PRMT7Q9NVM4 692 aaPredicted RBP12.56□□□□□ -0.4
BRCA1-213ENST00000476777 COL4A2P08572 1712 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 LRRIQ4A6NIV6 560 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 N4BP3O15049 544 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 MICAL2O94851 1124 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 ABLIM3O94929 683 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 CHRNB1P11230 501 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 PSMA5P28066 241 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 CCR2P41597 374 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 CXCL12P48061 93 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 DMWDQ09019 674 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 GAS6Q14393 721 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
BRCA1-213ENST00000476777 SLC8B1Q6J4K2 584 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 PIK3AP1Q6ZUJ8 805 aa12.55□□□□□ -0.4
BRCA1-213ENST00000476777 ANKS3Q6ZW76 656 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms