RNA–Protein interactions for RNA: ENST00000471772.6

RPS27A-207, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-207ENST00000471772 SNX27Q96L92 541 aa8.68□□□□□ -1.02
RPS27A-207ENST00000471772 NGRNQ9NPE2 291 aaKnown RBP8.68□□□□□ -1.02
RPS27A-207ENST00000471772 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
RPS27A-207ENST00000471772 DERAQ9Y315 318 aa8.68□□□□□ -1.02
RPS27A-207ENST00000471772 PCDHA5Q9Y5H7 936 aa8.68□□□□□ -1.02
RPS27A-207ENST00000471772 PLXNA4Q9HCM2 1894 aa8.68□□□□□ -1.02
RPS27A-207ENST00000471772 SCN1AP35498 2009 aa8.68□□□□□ -1.02
RPS27A-207ENST00000471772 ZNF233A6NK53 670 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 TISP43B9A030 160 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 NT5C1B-RDH14C9J2C7 533 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 TMEM189-UBE2V1I3L0A0 370 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 FSCN2O14926 492 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 MEFVO15553 781 aaPredicted RBP8.67□□□□□ -1.02
RPS27A-207ENST00000471772 XPOTO43592 962 aaKnown RBP8.67□□□□□ -1.02
RPS27A-207ENST00000471772 B4GALT3O60512 393 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 TADA2AO75478 443 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 IL18RAPO95256 599 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 EFEMP2O95967 443 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 CXCL8P10145 99 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 PAX3P23760 479 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 DNAJB1P25685 340 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 TNFSF9P41273 254 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 ACOT2P49753 483 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 ERVFC1P60507 584 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 PPP2R3AQ06190 1150 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 SURF1Q15526 300 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 SEZ6Q53EL9 994 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 TIGD5Q53EQ6 642 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 COBLL1Q53SF7 1204 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 ZNF658Q5TYW1 1059 aaPredicted RBP8.67□□□□□ -1.02
RPS27A-207ENST00000471772 ARMCX5Q6P1M9 558 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 SLC9A9Q8IVB4 645 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 GPD1LQ8N335 351 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 MICAL1Q8TDZ2 1067 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 FBXL18Q96ME1 805 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 ZMAT2Q96NC0 199 aaKnown RBP8.67□□□□□ -1.02
RPS27A-207ENST00000471772 CBWD1Q9BRT8 395 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 CXCL16Q9H2A7 254 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 IKZF4Q9H2S9 585 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 KCTD10Q9H3F6 313 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 NSUN3Q9H649 340 aaKnown RBP8.67□□□□□ -1.02
RPS27A-207ENST00000471772 TLR9Q9NR96 1032 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 AGPAT3Q9NRZ7 376 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 LMBRD1Q9NUN5 540 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 TRAF3IP3Q9Y228 551 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 SSX2IPQ9Y2D8 614 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 C2CD2Q9Y426 696 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 IRAK3Q9Y616 596 aa8.67□□□□□ -1.02
RPS27A-207ENST00000471772 MTCL1Q9Y4B5 1905 aaKnown RBP8.66□□□□□ -1.02
RPS27A-207ENST00000471772 FSD2A1L4K1 749 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 TRAPPC3O43617 180 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 CXCL14O95715 111 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 PBX3P40426 434 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 PPP1R2P41236 205 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 TERF1P54274 439 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 ELAVL2Q12926 359 aaKnown RBP8.66□□□□□ -1.02
RPS27A-207ENST00000471772 NFIL3Q16649 462 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 UPP1Q16831 310 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 GLRA4Q5JXX5 417 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 ZBTB41Q5SVQ8 909 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 SPATA1Q5VX52 437 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 TMC7Q7Z402 723 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 BRSK2Q8IWQ3 736 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 NELFCDQ8IXH7 590 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 VPS52Q8N1B4 723 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 MRPL43Q8N983 215 aaKnown RBP8.66□□□□□ -1.02
RPS27A-207ENST00000471772 XXYLT1Q8NBI6 393 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 MAFAQ8NHW3 353 aaPredicted RBP8.66□□□□□ -1.02
RPS27A-207ENST00000471772 CACTINQ8WUQ7 758 aaKnown RBP8.66□□□□□ -1.02
RPS27A-207ENST00000471772 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 CDCA3Q99618 268 aaPredicted RBP8.66□□□□□ -1.02
RPS27A-207ENST00000471772 FAM213AQ9BRX8 229 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 PCIF1Q9H4Z3 704 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 CHST7Q9NS84 486 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 DMAC2Q9NW81 257 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 HSPBP1Q9NZL4 362 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 ADAM28Q9UKQ2 775 aa8.66□□□□□ -1.02
RPS27A-207ENST00000471772 UBQLN1Q9UMX0 589 aaKnown RBP8.66□□□□□ -1.02
RPS27A-207ENST00000471772 CUL9Q8IWT3 2517 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 CASTOR2A6NHX0 329 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 CLIC2O15247 247 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 CALUO43852 315 aaPredicted RBP8.65□□□□□ -1.02
RPS27A-207ENST00000471772 LILRB3O75022 631 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 B3GAT3O94766 335 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 SLC34A2O95436 690 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 C1RP00736 705 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 SOD2P04179 222 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 CTSAP10619 480 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 RPL13P26373 211 aaKnown RBP8.65□□□□□ -1.02
RPS27A-207ENST00000471772 LRPAP1P30533 357 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 CLCNKBP51801 687 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 SOX4Q06945 474 aaPredicted RBP8.65□□□□□ -1.02
RPS27A-207ENST00000471772 SMC1AQ14683 1233 aaKnown RBP8.65□□□□□ -1.02
RPS27A-207ENST00000471772 COL19A1Q14993 1142 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 TMEM132DQ14C87 1099 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 USP41Q3LFD5 358 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 KIAA0319Q5VV43 1072 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 FUT10Q6P4F1 479 aa8.65□□□□□ -1.02
RPS27A-207ENST00000471772 TMEM173Q86WV6 379 aaPredicted RBP8.65□□□□□ -1.02
RPS27A-207ENST00000471772 RNF168Q8IYW5 571 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms