RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	CHMP4BP1	P59074	171 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	C1QTNF8	P60827	252 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	ZNF200	P98182	395 aa	Predicted RBP	11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	KLHL30	Q0D2K2	578 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	DRAP1	Q14919	205 aa	Predicted RBP	11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	SPA17	Q15506	151 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	PKN2	Q16513	984 aa	Known RBP	11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	XKR4	Q5GH76	650 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	FAM47C	Q5HY64	1035 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	TOGARAM2	Q6ZUX3	1019 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	TRAPPC11	Q7Z392	1133 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	THNSL1	Q8IYQ7	743 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	FAM71A	Q8IYT1	594 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	ANKRD36BP1	Q96IX9	119 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	SYT11	Q9BT88	431 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	IMPG2	Q9BZV3	1241 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	GPR88	Q9GZN0	384 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	HAUS4	Q9H6D7	363 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	CDHR5	Q9HBB8	845 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	MYO1A	Q9UBC5	1043 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	CNTN6	Q9UQ52	1028 aa		11.87	□□□□□ -0.51
MUC1-216	ENST00000467134	ARVCF	O00192	962 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	GPR182	O15218	404 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	TMEM191B	P0C7N4	346 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	CXCL8	P10145	99 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	HARS	P12081	509 aa	Known RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	KCNE1	P15382	129 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	EIF4A3	P38919	411 aa	Known RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	RAB27A	P51159	221 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	KIF11	P52732	1056 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	BPIFB4	P59827	614 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	BIRC3	Q13489	604 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	NCOA4	Q13772	614 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	BMS1	Q14692	1282 aa	Known RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	MTF1	Q14872	753 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	SLC18A3	Q16572	532 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	SGSM1	Q2NKQ1	1148 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	SLC10A6	Q3KNW5	377 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	TDRD12	Q587J7	1177 aa	Known RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	FAM228A	Q86W67	206 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	ARHGEF19	Q8IW93	802 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	HACE1	Q8IYU2	909 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	TTC39C	Q8N584	583 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	DNAJC5G	Q8N7S2	189 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	OR5B17	Q8NGF7	314 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	CAGE1	Q8TC20	777 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	TMEM40	Q8WWA1	233 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	CPB2	Q96IY4	423 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	ZNF668	Q96K58	619 aa	Predicted RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	SNX27	Q96L92	541 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	POP1	Q99575	1024 aa	Known RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	TSGA10	Q9BZW7	698 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	CRISPLD2	Q9H0B8	497 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	CNTN3	Q9P232	1028 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	ITGA11	Q9UKX5	1188 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	INTU	Q9ULD6	942 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	NENF	Q9UMX5	172 aa		11.86	□□□□□ -0.51
MUC1-216	ENST00000467134	PJA2	O43164	708 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	XPOT	O43592	962 aa	Known RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	AKR1B10	O60218	316 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	EVI5	O60447	810 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	PHACTR2	O75167	634 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	OFD1	O75665	1012 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	CHRNA1	P02708	482 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	SKI	P12755	728 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	CDK7	P50613	346 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	VAV2	P52735	878 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	YARS	P54577	528 aa	Known RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	YWHAE	P62258	255 aa	Known RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	APBA1	Q02410	837 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	TMEM62	Q0P6H9	643 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	TMEM132D	Q14C87	1099 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	PTPN14	Q15678	1187 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	ZBTB6	Q15916	424 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	FBXO47	Q5MNV8	452 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	UBXN11	Q5T124	520 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	ALKAL1	Q6UXT8	129 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	EFCAB13	Q8IY85	973 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	PPM1K	Q8N3J5	372 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	CEP120	Q8N960	986 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	KREMEN1	Q96MU8	473 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	PPP1R16B	Q96T49	567 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	UNC93B1	Q9H1C4	597 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	DEF6	Q9H4E7	631 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	ERVK-5	Q9HDB9	667 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	STARD7	Q9NQZ5	370 aa		11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	PIN4	Q9Y237	131 aa	Known RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	REXO2	Q9Y3B8	237 aa	Known RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	NOC2L	Q9Y3T9	749 aa	Known RBP	11.85	□□□□□ -0.51
MUC1-216	ENST00000467134	USP27X	A6NNY8	438 aa		11.84	□□□□□ -0.51
MUC1-216	ENST00000467134	BTNL10	A8MVZ5	291 aa		11.84	□□□□□ -0.51
MUC1-216	ENST00000467134	LACTBL1	A8MY62	500 aa		11.84	□□□□□ -0.51
MUC1-216	ENST00000467134	FOXN3	O00409	490 aa	Predicted RBP	11.84	□□□□□ -0.51
MUC1-216	ENST00000467134	MEFV	O15553	781 aa	Predicted RBP	11.84	□□□□□ -0.51
MUC1-216	ENST00000467134	ZNF623	O75123	536 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms