RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 RPS19P39019 145 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 TM4SF4P48230 202 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 ALDH5A1P51649 535 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 KHDC1LQ5JSQ8 128 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 MFSD14BQ5SR56 506 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 GORABQ5T7V8 394 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 EMC10Q5UCC4 262 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 AFMIDQ63HM1 303 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 APOA5Q6Q788 366 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 FRMD5Q7Z6J6 570 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 FAM90A1Q86YD7 464 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 SP8Q8IXZ3 490 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 FAM186BQ8IYM0 893 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 SH2D3CQ8N5H7 860 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 IL31RAQ8NI17 732 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 RAB24Q969Q5 203 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 PGBD4Q96DM1 585 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 NEIL1Q96FI4 390 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 TOX2Q96NM4 488 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 KCNH6Q9H252 994 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 MRPL46Q9H2W6 279 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 C12orf65Q9H3J6 166 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZMAT3Q9HA38 289 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 ATP6V0A4Q9HBG4 840 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 KIAA1586Q9HCI6 787 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZDHHC8Q9ULC8 765 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 CLCA2Q9UQC9 943 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 PCDHGB6Q9Y5F9 930 aa5.43□□□□□ -1.54
CDC42BPA-211ENST00000466538 LOC102724159A0A0B4J2E5 919 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 TBKBP1A7MCY6 615 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 AMHP03971 560 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 RAP2AP10114 183 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 ATP5JP18859 108 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 FPR1P21462 350 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 TXKP42681 527 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 ALDH1A3P47895 512 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 EPHB4P54760 987 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 CLRN1P58418 232 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 SAFB2Q14151 953 aaKnown RBP eCLIP5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 PWP2Q15269 919 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 NT5DC1Q5TFE4 455 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 MFSD5Q6N075 450 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 FAM111BQ6SJ93 734 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 DOK3Q7L591 496 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 MORC1Q86VD1 984 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 ACRBPQ8NEB7 543 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 ARL8AQ96BM9 186 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 CEP95Q96GE4 821 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 LMF1Q96S06 567 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 POLR3GLQ9BT43 218 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 MRI1Q9BV20 369 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 RLIMQ9NVW2 624 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 RTEL1Q9NZ71 1219 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 OAZ3Q9UMX2 235 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 PCDHA1Q9Y5I3 950 aa5.42□□□□□ -1.54
CDC42BPA-211ENST00000466538 RHPN2P1A8MT19 583 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 CXorf49A8MYA2 514 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 MYO1FO00160 1098 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 SLC43A1O75387 559 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 INHBBP09529 407 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZKSCAN1P17029 563 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 PIK3CGP48736 1102 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 BTKQ06187 659 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 BMT2Q1RMZ1 405 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 METTL24Q5JXM2 366 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 SLFN13Q68D06 897 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 APBB1IPQ7Z5R6 666 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 SRLQ86TD4 932 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 FAM83AQ86UY5 434 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 GPR135Q8IZ08 494 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 SPICE1Q8N0Z3 855 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 AOPEPQ8N6M6 819 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 DCBLD1Q8N8Z6 715 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 KBTBD7Q8WVZ9 684 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZC3H10Q96K80 434 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 CCDC138Q96M89 665 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 NT5C1BQ96P26 610 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 TBCBQ99426 244 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 MPHOSPH9Q99550 1183 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 CHMP4AQ9BY43 222 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 EPC1Q9H2F5 836 aa5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 AGO3Q9H9G7 860 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-211ENST00000466538 GRM6O15303 877 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 CDC14BO60729 498 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 POMCP01189 267 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 ANXA1P04083 346 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 CD1AP06126 327 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 THP07101 528 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 GNAI3P08754 354 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 ALAS1P13196 640 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 PIK3CBP42338 1070 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 GNAI1P63096 354 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 FMO1Q01740 532 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 UBXN2BQ14CS0 331 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 CNGA2Q16280 664 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 PPP1R3BQ86XI6 285 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 PDSS2Q86YH6 399 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 FBXO18Q8NFZ0 1043 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZFP28Q8NHY6 868 aa5.4□□□□□ -1.54
CDC42BPA-211ENST00000466538 ZSCAN18Q8TBC5 510 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms