RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 LMAN1LQ9HAT1 526 aa16.01■□□□□ 0.15
CXCR4-203ENST00000466288 CDY1Q9Y6F8 540 aa16.01■□□□□ 0.15
CXCR4-203ENST00000466288 LAMA1P25391 3075 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 TBX3O15119 743 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 HRO43593 1189 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 DEXIO95424 95 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 RPS6KB1P23443 525 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 SSRP1Q08945 709 aaKnown RBP16■□□□□ 0.15
CXCR4-203ENST00000466288 GAS6Q14393 721 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 BMP2KLQ5H9B9 411 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 MAP4K3Q8IVH8 894 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 AIFM3Q96NN9 605 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 BRD9Q9H8M2 597 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 SNX14Q9Y5W7 946 aa16■□□□□ 0.15
CXCR4-203ENST00000466288 TTLL13PA6NNM8 815 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 DGAT1O75907 488 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 CHRNB1P11230 501 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 GCFC2P16383 781 aaKnown RBP15.99■□□□□ 0.15
CXCR4-203ENST00000466288 SATB1Q01826 763 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 DMWDQ09019 674 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 SIM2Q14190 667 aaPredicted RBP15.99■□□□□ 0.15
CXCR4-203ENST00000466288 FAM78AQ5JUQ0 283 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 PRSS36Q5K4E3 855 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 CD300LGQ6UXG3 332 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 NEK8Q86SG6 692 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 TPH2Q8IWU9 490 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 FAM177A1Q8N128 213 aaPredicted RBP15.99■□□□□ 0.15
CXCR4-203ENST00000466288 FAM3CQ92520 227 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 TRMT61BQ9BVS5 477 aaKnown RBP15.99■□□□□ 0.15
CXCR4-203ENST00000466288 ZFP14Q9HCL3 533 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 ZNF334Q9HCZ1 680 aaPredicted RBP15.99■□□□□ 0.15
CXCR4-203ENST00000466288 TRPV5Q9NQA5 729 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 SNTG2Q9NY99 539 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 ANGPTL2Q9UKU9 493 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 BACE2Q9Y5Z0 518 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 F5P12259 2224 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 WDFY3Q8IZQ1 3526 aa15.99■□□□□ 0.15
CXCR4-203ENST00000466288 ARHGEF37A1IGU5 675 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 TMEM189-UBE2V1I3L0A0 370 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 CCNT1O60563 726 aaKnown RBP15.98■□□□□ 0.15
CXCR4-203ENST00000466288 RECQL4O94761 1208 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 LYPLA2O95372 231 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 PTPN2P17706 415 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 PMLP29590 882 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 CXCL12P48061 93 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 SRSF5Q13243 272 aaKnown RBP15.98■□□□□ 0.15
CXCR4-203ENST00000466288 DDX1Q92499 740 aaKnown RBP15.98■□□□□ 0.15
CXCR4-203ENST00000466288 IRF7Q92985 503 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 TCEAL4Q96EI5 215 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 PRIMPOLQ96LW4 560 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 ASB16Q96NS5 453 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 FZD8Q9H461 694 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 ANKEF1Q9NU02 776 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 KCNJ14Q9UNX9 436 aa15.98■□□□□ 0.15
CXCR4-203ENST00000466288 VITQ6UXI7 678 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 DDX27Q96GQ7 796 aaKnown RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 HSD17B14Q9BPX1 270 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 EIF2AK1Q9BQI3 630 aaKnown RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 POLR3FQ9H1D9 316 aaPredicted RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 PDZD7Q9H5P4 517 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 PRMT7Q9NVM4 692 aaPredicted RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 PIAS3Q9Y6X2 628 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 CCDC194A0A1B0GVG4 234 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 CHURC1-FNTBB4DL54 471 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 FOXD2O60548 495 aaPredicted RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 B3GAT3O94766 335 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 MICAL2O94851 1124 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 TKTP29401 623 aaKnown RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 GDI1P31150 447 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 HSPA4P34932 840 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 CNR2P34972 360 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 CCR2P41597 374 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 FNTBP49356 437 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 RARRES1P49788 294 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 SHC2P98077 582 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 FAM187BQ17R55 369 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 N4BP2L1Q5TBK1 243 aaPredicted RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 CDCA2Q69YH5 1023 aaPredicted RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 ANKS3Q6ZW76 656 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.97■□□□□ 0.15
CXCR4-203ENST00000466288 NOSTRINQ8IVI9 506 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 ZNF461Q8TAF7 563 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 CORO1BQ9BR76 489 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 GPRC5CQ9NQ84 441 aa15.97■□□□□ 0.15
CXCR4-203ENST00000466288 VWA8A3KMH1 1905 aa15.96■□□□□ 0.15
CXCR4-203ENST00000466288 BAHCC1Q9P281 2608 aa15.96■□□□□ 0.15
CXCR4-203ENST00000466288 WDR27A2RRH5 827 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 LRRIQ4A6NIV6 560 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 K7ESF4 209 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 TM4SF5O14894 197 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 MARCH6O60337 910 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 ABLIM3O94929 683 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 PAPSS2O95340 614 aaPredicted RBP15.96■□□□□ 0.14
CXCR4-203ENST00000466288 LRG1P02750 347 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 PSMC3P17980 439 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 RBM25P49756 843 aaKnown RBP15.96■□□□□ 0.14
CXCR4-203ENST00000466288 CLCNKBP51801 687 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 ROR1Q01973 937 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 SLC8B1Q6J4K2 584 aa15.96■□□□□ 0.14
CXCR4-203ENST00000466288 SLFN12Q8IYM2 578 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms