RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TMC7Q7Z402 723 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 DDX53Q86TM3 631 aaKnown RBP13.47□□□□□ -0.25
CHPF2-202ENST00000465601 VPS52Q8N1B4 723 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 TMEM130Q8N3G9 435 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 SMARCE1Q969G3 411 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 GBP4Q96PP9 640 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 VN1R3Q9BXE9 311 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 NSUN3Q9H649 340 aaKnown RBP13.47□□□□□ -0.25
CHPF2-202ENST00000465601 AGPAT3Q9NRZ7 376 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 HOOK1Q9UJC3 728 aaKnown RBP13.47□□□□□ -0.25
CHPF2-202ENST00000465601 MAPK8IP1Q9UQF2 711 aa13.47□□□□□ -0.25
CHPF2-202ENST00000465601 SCN1AP35498 2009 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 FSCN2O14926 492 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 EXTL3O43909 919 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 TADA2AO75478 443 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 LDHAP00338 332 aaKnown RBP13.46□□□□□ -0.25
CHPF2-202ENST00000465601 ADRB2P07550 413 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 CLCNKBP51801 687 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
CHPF2-202ENST00000465601 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 TAS1R1Q7RTX1 841 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 CD302Q8IX05 232 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 ELOA2Q8IYF1 753 aaPredicted RBP13.46□□□□□ -0.25
CHPF2-202ENST00000465601 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 GSDMAQ96QA5 445 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 TCF25Q9BQ70 676 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 ENTPD7Q9NQZ7 604 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 SLC38A7Q9NVC3 462 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 HSPBP1Q9NZL4 362 aa13.46□□□□□ -0.25
CHPF2-202ENST00000465601 KIF4AO95239 1232 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 CXCL14O95715 111 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 CA8P35219 290 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 CYP2J2P51589 502 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 GUCY2FP51841 1108 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 WNT7BP56706 349 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 SNRPFP62306 86 aaKnown RBP13.45□□□□□ -0.26
CHPF2-202ENST00000465601 ZBTB6Q15916 424 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 UPP1Q16831 310 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 ISM2Q6H9L7 571 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 JADE1Q6IE81 842 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 DCLRE1AQ6PJP8 1040 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 RBM23Q86U06 439 aaKnown RBP13.45□□□□□ -0.26
CHPF2-202ENST00000465601 SMYD4Q8IYR2 804 aaPredicted RBP13.45□□□□□ -0.26
CHPF2-202ENST00000465601 GPD1LQ8N335 351 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 RDH13Q8NBN7 331 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 SPATA20Q8TB22 786 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 AUTS2Q8WXX7 1259 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 UROC1Q96N76 676 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 GPR62Q9BZJ7 368 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 ZBP1Q9H171 429 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 KCTD10Q9H3F6 313 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 IGFLR1Q9H665 355 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 NGRNQ9NPE2 291 aaKnown RBP13.45□□□□□ -0.26
CHPF2-202ENST00000465601 PRDM6Q9NQX0 595 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 RMND1Q9NWS8 449 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 TUBGCP4Q9UGJ1 667 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 ADAM28Q9UKQ2 775 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 NCOR1O75376 2440 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 VWA8A3KMH1 1905 aa13.45□□□□□ -0.26
CHPF2-202ENST00000465601 A0A0C4DFX4 3053 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 SPTBN5Q9NRC6 3674 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 ZNF233A6NK53 670 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 HIDE1A8MVS5 230 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 PODXLO00592 558 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 PER2O15055 1255 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 KIAA0391O15091 583 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 B3GAT3O94766 335 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 EFEMP2O95967 443 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 NFICP08651 508 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 CTSAP10619 480 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 POU5F1Q01860 360 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 TMEM132DQ14C87 1099 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 CAMK4Q16566 473 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 CD300LGQ6UXG3 332 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 CBWD2Q8IUF1 395 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 BRSK2Q8IWQ3 736 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 GUF1Q8N442 669 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 MRPL43Q8N983 215 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 ASB7Q9H672 318 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 TLE6Q9H808 572 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 RBAKQ9NYW8 714 aaPredicted RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 CGNQ9P2M7 1197 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 MAN1B1Q9UKM7 699 aa13.44□□□□□ -0.26
CHPF2-202ENST00000465601 UBQLN1Q9UMX0 589 aaKnown RBP13.44□□□□□ -0.26
CHPF2-202ENST00000465601 C2orf71A6NGG8 1288 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 PDXKO00764 312 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 C2CD2LO14523 706 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
CHPF2-202ENST00000465601 KIF20AO95235 890 aa13.43□□□□□ -0.26
CHPF2-202ENST00000465601 IL18RAPO95256 599 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms