RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ZCWPW2	Q504Y3	356 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	TCEAL5	Q5H9L2	206 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	JADE1	Q6IE81	842 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	ARMCX5	Q6P1M9	558 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	DDX53	Q86TM3	631 aa	Known RBP	11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	BRSK2	Q8IWQ3	736 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	GPT2	Q8TD30	523 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	PLEKHO2	Q8TD55	490 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	HASPIN	Q8TF76	798 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	PPM1E	Q8WY54	764 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	B3GALT6	Q96L58	329 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	FBXL18	Q96ME1	805 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	FAM193B	Q96PV7	902 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	ZBP1	Q9H171	429 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	PLEKHA5	Q9HAU0	1116 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	DMAC2	Q9NW81	257 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	HSPBP1	Q9NZL4	362 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	LMCD1	Q9NZU5	365 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	MAN1B1	Q9UKM7	699 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	FAN1	Q9Y2M0	1017 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	MYO9B	Q13459	2157 aa		11.17	□□□□□ -0.62
MRPL55-223	ENST00000459783	MYO7A	Q13402	2215 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783		I3L4J1	428 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	EXTL3	O43909	919 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	LILRB3	O75022	631 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	ALDH2	P05091	517 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	CD44	P16070	742 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	CYP2J2	P51589	502 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	UBE3A	Q05086	875 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	HYAL1	Q12794	435 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	COL19A1	Q14993	1142 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	CAMK4	Q16566	473 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	UPP1	Q16831	310 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	PLPP4	Q5VZY2	271 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	ISM2	Q6H9L7	571 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	STXBP4	Q6ZWJ1	553 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	C12orf56	Q8IXR9	622 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	VPS52	Q8N1B4	723 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	VN1R2	Q8NFZ6	395 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	TMEM169	Q96HH4	297 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	RPF1	Q9H9Y2	349 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	TLR9	Q9NR96	1032 aa		11.16	□□□□□ -0.62
MRPL55-223	ENST00000459783	TDRD15	B5MCY1	1934 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	LINC01565	O15544	149 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	CTSA	P10619	480 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	PRCP	P42785	496 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	BRCC3	P46736	316 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	CASP4	P49662	377 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	PMS1	P54277	932 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	PPP2R3A	Q06190	1150 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	PTPN14	Q15678	1187 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	KYAT1	Q16773	422 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	PTPRO	Q16827	1216 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	RTP2	Q5QGT7	225 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	FUT10	Q6P4F1	479 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	GPD1L	Q8N335	351 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	GUF1	Q8N442	669 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	CXorf38	Q8TB03	319 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	SMARCE1	Q969G3	411 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	FAM212A	Q96EL1	285 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	KIF12	Q96FN5	646 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	GSDMA	Q96QA5	445 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	TCF25	Q9BQ70	676 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	HERC2P3	Q9BVR0	1158 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	CLSTN2	Q9H4D0	955 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	NSUN3	Q9H649	340 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	PDE11A	Q9HCR9	933 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	CHST7	Q9NS84	486 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	ADAM28	Q9UKQ2	775 aa		11.15	□□□□□ -0.62
MRPL55-223	ENST00000459783	ANK1	P16157	1881 aa		11.15	□□□□□ -0.63
MRPL55-223	ENST00000459783	TRIP11	Q15643	1979 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	C2orf71	A6NGG8	1288 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	TMEM189-UBE2V1	I3L0A0	370 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	BIN1	O00499	593 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	PODXL	O00592	558 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	PDXK	O00764	312 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	PER2	O15055	1255 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	SPTLC1	O15269	473 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	GLP2R	O95838	553 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	SOD2	P04179	222 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	LRPAP1	P30533	357 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	POU5F1	Q01860	360 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	KRT17	Q04695	432 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	KCNC3	Q14003	757 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	MORC3	Q14149	939 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	TIGD5	Q53EQ6	642 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	COBLL1	Q53SF7	1204 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	KIAA0319	Q5VV43	1072 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	SPATA1	Q5VX52	437 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	ADSSL1	Q8N142	457 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	MRPL43	Q8N983	215 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	RDH13	Q8NBN7	331 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	OR5B17	Q8NGF7	314 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	FEZF2	Q8TBJ5	459 aa		11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	NOC3L	Q8WTT2	800 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-223	ENST00000459783	TMEM174	Q8WUU8	243 aa		11.14	□□□□□ -0.63

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