RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 EPB41P11171 864 aaKnown RBP15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 PAX3P23760 479 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 BMPR1AP36894 532 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 PBX2P40425 430 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 ALDH7A1P49419 539 aaKnown RBP15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 ERVK-21P61565 698 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 CLDN10P78369 228 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 TMEM132DQ14C87 1099 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 NAB2Q15742 525 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 ZSCAN23Q3MJ62 389 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 CEP135Q66GS9 1140 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 WDR49Q8IV35 697 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 COLGALT2Q8IYK4 626 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 FAM186BQ8IYM0 893 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 BEST2Q8NFU1 509 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 ENOX1Q8TC92 643 aaKnown RBP15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 ZMAT2Q96NC0 199 aaKnown RBP15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 ZNF558Q96NG5 402 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 TGS1Q96RS0 853 aaKnown RBP15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 FNBP1Q96RU3 617 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 DUSP9Q99956 384 aaKnown RBP15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 NRDE2Q9H7Z3 1164 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 PCDHB12Q9Y5F1 795 aa15.51■□□□□ 0.07
HMGXB4-204ENST00000455359 TRIM49BA6NDI0 452 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 LINC00271P0C7V0 271 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 KRT13P13646 458 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 PRKCSHP14314 528 aaPredicted RBP15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 MYOGP15173 224 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 TAP1Q03518 808 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 DUOXA2Q1HG44 320 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 HABP4Q5JVS0 413 aaKnown RBP15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 SPOUT1Q5T280 376 aaKnown RBP15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 SPATA1Q5VX52 437 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 PPP2R2DQ66LE6 453 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 ZNF280BQ86YH2 543 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 RDH13Q8NBN7 331 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 ZSWIM2Q8NEG5 633 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 BPIFA3Q9BQP9 254 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 FUCA2Q9BTY2 467 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 COLEC11Q9BWP8 271 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 PDE11AQ9HCR9 933 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 PLAGL2Q9UPG8 496 aa15.5■□□□□ 0.07
HMGXB4-204ENST00000455359 SYCE3A1L190 88 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 TMEM189-UBE2V1I3L0A0 370 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 STX10O60499 249 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 DDHD2O94830 711 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 GALTP07902 379 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 LRPAP1P30533 357 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 CASP4P49662 377 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 MARSP56192 900 aaKnown RBP15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 BCAR1P56945 870 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 STX17P56962 302 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 GLRA4Q5JXX5 417 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 JADE1Q6IE81 842 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 DCLRE1AQ6PJP8 1040 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 KCNT2Q6UVM3 1135 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 COLGALT1Q8NBJ5 622 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 PARD3BQ8TEW8 1205 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 BORCS6Q96GS4 357 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 CGRRF1Q99675 332 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 INTS13Q9NVM9 706 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 FAN1Q9Y2M0 1017 aa15.49■□□□□ 0.07
HMGXB4-204ENST00000455359 ZC3H11AO75152 810 aaKnown RBP eCLIP15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 TNNC2P02585 160 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 NFICP08651 508 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 GTF2H1P32780 548 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 VAMP7P51809 220 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 PLCB3Q01970 1234 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 UBE3AQ05086 875 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 BFSP1Q12934 665 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 TPD52L1Q16890 204 aaPredicted RBP15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 FAM114A1Q8IWE2 563 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 SLC39A11Q8N1S5 342 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 CCDC127Q96BQ5 260 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 ANKRD36BP1Q96IX9 119 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 MED15Q96RN5 788 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 C11orf84Q9BUA3 381 aaPredicted RBP15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 SRRTQ9BXP5 876 aaKnown RBP15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 CXCL16Q9H2A7 254 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 THAP9Q9H5L6 903 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 SPG21Q9NZD8 308 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 ITGA11Q9UKX5 1188 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 LZTS1Q9Y250 596 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 LAMA3Q16787 3333 aa15.48■□□□□ 0.07
HMGXB4-204ENST00000455359 DLATP10515 647 aaKnown RBP15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 TNNI1P19237 187 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 CTNNB1P35222 781 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 SLC11A1P49279 550 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 TFAMQ00059 246 aaKnown RBP15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 MYL5Q02045 173 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 KRT17Q04695 432 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 UPP1Q16831 310 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 EPC2Q52LR7 807 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 EFCAB13Q8IY85 973 aa15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 C18orf25Q96B23 403 aaPredicted RBP15.47■□□□□ 0.07
HMGXB4-204ENST00000455359 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms