RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 RPL9P32969 192 aaKnown RBP23.9■■□□□ 1.42
APOE-204ENST00000446996 PBX3P40426 434 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 ACOT2P49753 483 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 CAMK1Q14012 370 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 ZBTB6Q15916 424 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 TIGD5Q53EQ6 642 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 ZBTB41Q5SVQ8 909 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 SLC9A9Q8IVB4 645 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 UBQLN1Q9UMX0 589 aaKnown RBP23.9■■□□□ 1.42
APOE-204ENST00000446996 TRAF3IP3Q9Y228 551 aa23.9■■□□□ 1.42
APOE-204ENST00000446996 TMEM189-UBE2V1I3L0A0 370 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 EFEMP2O95967 443 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 PPP1R2P41236 205 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 BMS1Q14692 1282 aaKnown RBP23.89■■□□□ 1.41
APOE-204ENST00000446996 NFIL3Q16649 462 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 GLRA4Q5JXX5 417 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 BRSK2Q8IWQ3 736 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 NGRNQ9NPE2 291 aaKnown RBP23.89■■□□□ 1.41
APOE-204ENST00000446996 TLR9Q9NR96 1032 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 MARCH5Q9NX47 278 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 HSPBP1Q9NZL4 362 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 C2CD2Q9Y426 696 aa23.89■■□□□ 1.41
APOE-204ENST00000446996 UNC80Q8N2C7 3258 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 FSCN2O14926 492 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 DNAJB1P25685 340 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 SURF1Q15526 300 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 DCLRE1AQ6PJP8 1040 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 TMEM173Q86WV6 379 aaPredicted RBP23.88■■□□□ 1.41
APOE-204ENST00000446996 XXYLT1Q8NBI6 393 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 FAM213AQ9BRX8 229 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 PCIF1Q9H4Z3 704 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 DMAC2Q9NW81 257 aa23.88■■□□□ 1.41
APOE-204ENST00000446996 ATG2AQ2TAZ0 1938 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 ZNF233A6NK53 670 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 CALUO43852 315 aaPredicted RBP23.87■■□□□ 1.41
APOE-204ENST00000446996 LRPAP1P30533 357 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 GPR65Q8IYL9 337 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 RNF168Q8IYW5 571 aaPredicted RBP23.87■■□□□ 1.41
APOE-204ENST00000446996 SAAL1Q96ER3 474 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 KIF12Q96FN5 646 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 NSUN3Q9H649 340 aaKnown RBP23.87■■□□□ 1.41
APOE-204ENST00000446996 ADAM28Q9UKQ2 775 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 PRG3Q9Y2Y8 225 aaPredicted RBP23.87■■□□□ 1.41
APOE-204ENST00000446996 MYO7AQ13402 2215 aa23.87■■□□□ 1.41
APOE-204ENST00000446996 CASTOR2A6NHX0 329 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 CLIC2O15247 247 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 SOX4Q06945 474 aaPredicted RBP23.86■■□□□ 1.41
APOE-204ENST00000446996 ELAVL2Q12926 359 aaKnown RBP23.86■■□□□ 1.41
APOE-204ENST00000446996 UPP1Q16831 310 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 SPATA1Q5VX52 437 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 TRIML1Q8N9V2 468 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 BCL7CQ8WUZ0 217 aaPredicted RBP23.86■■□□□ 1.41
APOE-204ENST00000446996 PPP2R3CQ969Q6 453 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 CLSTN2Q9H4D0 955 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 KIAA1468Q9P260 1216 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 MAN1B1Q9UKM7 699 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 IRAK3Q9Y616 596 aa23.86■■□□□ 1.41
APOE-204ENST00000446996 TADA2AO75478 443 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 SOD2P04179 222 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 CTSAP10619 480 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 PAX3P23760 479 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 VPS52Q8N1B4 723 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 ZSWIM2Q8NEG5 633 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 BEST2Q8NFU1 509 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 ERCC4Q92889 916 aaPredicted RBP23.85■■□□□ 1.41
APOE-204ENST00000446996 FAM212AQ96EL1 285 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 PAAF1Q9BRP4 392 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 HERC2P3Q9BVR0 1158 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 ZBP1Q9H171 429 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 RBAKQ9NYW8 714 aaPredicted RBP23.85■■□□□ 1.41
APOE-204ENST00000446996 SSX2IPQ9Y2D8 614 aa23.85■■□□□ 1.41
APOE-204ENST00000446996 GOLGA8IPA6NC78 632 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 GOLGA8JA6NMD2 632 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 NCK2O43639 380 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 PRCPP42785 496 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 CLCNKBP51801 687 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 ERVFC1P60507 584 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 MORC3Q14149 939 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 TMEM132DQ14C87 1099 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 JADE1Q6IE81 842 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 FUT10Q6P4F1 479 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 TMC7Q7Z402 723 aa23.84■■□□□ 1.41
APOE-204ENST00000446996 MAFAQ8NHW3 353 aaPredicted RBP23.84■■□□□ 1.41
APOE-204ENST00000446996 FSD2A1L4K1 749 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 PODXLO00592 558 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 STIM1Q13586 685 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 SMC1AQ14683 1233 aaKnown RBP23.83■■□□□ 1.41
APOE-204ENST00000446996 SNRNP35Q16560 246 aaKnown RBP23.83■■□□□ 1.41
APOE-204ENST00000446996 EDRF1Q3B7T1 1238 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 CENPPQ6IPU0 288 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 ADSSL1Q8N142 457 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 MICAL1Q8TDZ2 1067 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 CACTINQ8WUQ7 758 aaKnown RBP23.83■■□□□ 1.41
APOE-204ENST00000446996 C18orf25Q96B23 403 aaPredicted RBP23.83■■□□□ 1.41
APOE-204ENST00000446996 TCF25Q9BQ70 676 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 VN1R3Q9BXE9 311 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 MAPK8IP1Q9UQF2 711 aa23.83■■□□□ 1.41
APOE-204ENST00000446996 SF3B1O75533 1304 aaKnown RBP eCLIP23.83■■□□□ 1.45e-10■■■■■ 120.6
APOE-204ENST00000446996 MAPK13O15264 365 aa23.82■■□□□ 1.4
APOE-204ENST00000446996 TRAPPC3O43617 180 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms