RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 RNF135Q8IUD6 432 aa22.99■■□□□ 1.27
CDKN3-204ENST00000442975 MAP4K3Q8IVH8 894 aa22.99■■□□□ 1.27
CDKN3-204ENST00000442975 C18orf25Q96B23 403 aaPredicted RBP22.99■■□□□ 1.27
CDKN3-204ENST00000442975 FIZ1Q96SL8 496 aa22.99■■□□□ 1.27
CDKN3-204ENST00000442975 MSTO1Q9BUK6 570 aa22.99■■□□□ 1.27
CDKN3-204ENST00000442975 HAPLN2Q9GZV7 340 aa22.99■■□□□ 1.27
CDKN3-204ENST00000442975 POMKQ9H5K3 350 aa22.99■■□□□ 1.27
CDKN3-204ENST00000442975 LOC730098B7Z3J9 87 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 PI4K2BG5E9Z4 385 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 PODXLO00592 558 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 MEFVO15553 781 aaPredicted RBP22.98■■□□□ 1.27
CDKN3-204ENST00000442975 PIGRP01833 764 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 CLTAP09496 248 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 ALADP13716 330 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 KCNE1P15382 129 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 IGFBP6P24592 240 aaPredicted RBP22.98■■□□□ 1.27
CDKN3-204ENST00000442975 ABCD1P33897 745 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 MTHFRP42898 656 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 PSMD5Q16401 504 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 UPP1Q16831 310 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 ZBTB41Q5SVQ8 909 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 DCLRE1AQ6PJP8 1040 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 KCNG4Q8TDN1 519 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 KCNN1Q92952 543 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 MRPL44Q9H9J2 332 aaKnown RBP22.98■■□□□ 1.27
CDKN3-204ENST00000442975 TBC1D7Q9P0N9 293 aa22.98■■□□□ 1.27
CDKN3-204ENST00000442975 TDRD15B5MCY1 1934 aaKnown RBP22.98■■□□□ 1.27
CDKN3-204ENST00000442975 TMEM189-UBE2V1I3L0A0 370 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 I3L4J1 428 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 CUTAO60888 179 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 SPATA31D3P0C874 917 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 GAP43P17677 238 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 TNFSF9P41273 254 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 ME1P48163 572 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 GTF2BQ00403 316 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 PPP2R3AQ06190 1150 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 SPAG1Q07617 926 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 SLC10A6Q3KNW5 377 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 ATAT1Q5SQI0 421 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.97■■□□□ 1.27
CDKN3-204ENST00000442975 SPATA31D4Q6ZUB0 917 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 C3orf58Q8NDZ4 430 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 FEZF2Q8TBJ5 459 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 PIK3R5Q8WYR1 880 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 DHX58Q96C10 678 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 TUBGCP4Q9UGJ1 667 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 DPP7Q9UHL4 492 aa22.97■■□□□ 1.27
CDKN3-204ENST00000442975 BRCC3P46736 316 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 DNM1Q05193 864 aaKnown RBP22.96■■□□□ 1.27
CDKN3-204ENST00000442975 KYAT1Q16773 422 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 TMEM31Q5JXX7 168 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 SLC39A4Q6P5W5 647 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 STAMQ92783 540 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 DNAJC19Q96DA6 116 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 KIF12Q96FN5 646 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 DDX27Q96GQ7 796 aaKnown RBP22.96■■□□□ 1.27
CDKN3-204ENST00000442975 FNIP2Q9P278 1114 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 SEL1LQ9UBV2 794 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 NR2E1Q9Y466 385 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 NUB1Q9Y5A7 615 aa22.96■■□□□ 1.27
CDKN3-204ENST00000442975 TISP43B9A030 160 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 OGTO15294 1046 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 TGM5O43548 720 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 TRAPPC3O43617 180 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 GCNT3O95395 438 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 HERC4Q5GLZ8 1057 aaPredicted RBP22.95■■□□□ 1.26
CDKN3-204ENST00000442975 SHC4Q6S5L8 630 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 GPR65Q8IYL9 337 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 FAM212AQ96EL1 285 aa22.95■■□□□ 1.26
CDKN3-204ENST00000442975 RPF1Q9H9Y2 349 aaKnown RBP22.95■■□□□ 1.26
CDKN3-204ENST00000442975 A0A0B4J269 797 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 RFPL2O75678 378 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 TKTP29401 623 aaKnown RBP22.94■■□□□ 1.26
CDKN3-204ENST00000442975 ENOX2Q16206 610 aaKnown RBP22.94■■□□□ 1.26
CDKN3-204ENST00000442975 PDXDC1Q6P996 788 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 ZNF720Q7Z2F6 126 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 GPR149Q86SP6 731 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 TDRD5Q8NAT2 981 aaKnown RBP22.94■■□□□ 1.26
CDKN3-204ENST00000442975 LNX1Q8TBB1 728 aaPredicted RBP22.94■■□□□ 1.26
CDKN3-204ENST00000442975 HVCN1Q96D96 273 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 TNMDQ9H2S6 317 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 IKZF4Q9H2S9 585 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 ST6GALNAC4Q9H4F1 302 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 PLEKHA5Q9HAU0 1116 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 CFAP45Q9UL16 551 aa22.94■■□□□ 1.26
CDKN3-204ENST00000442975 ANKRD63C9JTQ0 380 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 FAM189A1O60320 539 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 FGFR3P22607 806 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 RPL9P32969 192 aaKnown RBP22.93■■□□□ 1.26
CDKN3-204ENST00000442975 MCM4P33991 863 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 ADALQ6DHV7 355 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 CD300LGQ6UXG3 332 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 CCDC149Q6ZUS6 474 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 TMEM130Q8N3G9 435 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 CLSTN3Q9BQT9 956 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 PANK4Q9NVE7 773 aa22.93■■□□□ 1.26
CDKN3-204ENST00000442975 CCDC195A0A1B0GUA6 201 aa22.92■■□□□ 1.26
CDKN3-204ENST00000442975 TTC26A0AVF1 554 aa22.92■■□□□ 1.26
CDKN3-204ENST00000442975 C2CD4DB7Z1M9 353 aa22.92■■□□□ 1.26
CDKN3-204ENST00000442975 TULP1O00294 542 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms