RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 LARP4BQ92615 738 aaKnown RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 CALML4Q96GE6 196 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 B3GALT6Q96L58 329 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 TIPINQ9BVW5 301 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 GPR62Q9BZJ7 368 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 HAPLN2Q9GZV7 340 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 ZSCAN16Q9H4T2 348 aaPredicted RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 NGRNQ9NPE2 291 aaKnown RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 KANSL3Q9P2N6 904 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 PUF60Q9UHX1 559 aaKnown RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 CD207Q9UJ71 328 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 TNFSF13BQ9Y275 285 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 FAN1Q9Y2M0 1017 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 IRAK3Q9Y616 596 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 NCK2O43639 380 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 CXCL14O95715 111 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 F13A1P00488 732 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 EPCAMP16422 314 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 OR1G1P47890 313 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 SERPINB4P48594 390 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 ZP2Q05996 745 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 SOX4Q06945 474 aaPredicted RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 GRIK3Q13003 919 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 COASYQ13057 564 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 SMAD4Q13485 552 aaKnown RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 SMC1AQ14683 1233 aaKnown RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 SMAD2Q15796 467 aaKnown RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 DCAF4L1Q3SXM0 396 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 ZNF568Q3ZCX4 644 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 GLRA4Q5JXX5 417 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 CD300LGQ6UXG3 332 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 ZBTB33Q86T24 672 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 PPP2R3CQ969Q6 453 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 FAM193BQ96PV7 902 aaPredicted RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 PPP1R10Q96QC0 940 aaKnown RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 HERC2P3Q9BVR0 1158 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 APOL5Q9BWW9 433 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 MRPL4Q9BYD3 311 aaKnown RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 S1PR5Q9H228 398 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 IKZF4Q9H2S9 585 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 C17orf75Q9HAS0 396 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 KCND2Q9NZV8 630 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 ODF2LQ9ULJ1 636 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 ZDHHC9Q9Y397 364 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 USP15Q9Y4E8 981 aaPredicted RBP9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 HCFC2Q9Y5Z7 792 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 TSC2P49815 1807 aa9.37□□□□□ -0.91
HERPUD2-206ENST00000438224 CASTOR2A6NHX0 329 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 MYMKA6NI61 221 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 KIF4AO95239 1232 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ALDH2P05091 517 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 CNPP09543 421 aaKnown RBP9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 FBXO45P0C2W1 286 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 NMT1P30419 496 aaKnown RBP9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 GRM5P41594 1212 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 OSTNP61366 133 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 TUSC3Q13454 348 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 CRTC2Q53ET0 693 aaPredicted RBP9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 XKR4Q5GH76 650 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 AXDND1Q5T1B0 1012 aaPredicted RBP9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ANKRD54Q6NXT1 300 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 SLC39A4Q6P5W5 647 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 MPZL3Q6UWV2 235 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ALKAL1Q6UXT8 129 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 TMEM184AQ6ZMB5 413 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 HAUS6Q7Z4H7 955 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 HACE1Q8IYU2 909 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 HASPINQ8TF76 798 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 SLC22A17Q8WUG5 538 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 KCNN1Q92952 543 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 DNAJC19Q96DA6 116 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 SNX27Q96L92 541 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ZMAT2Q96NC0 199 aaKnown RBP9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 RPS6KC1Q96S38 1066 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 CDCA3Q99618 268 aaPredicted RBP9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 GOLGA2P5Q9HBQ8 144 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 RBM19Q9Y4C8 960 aaKnown RBP9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ZNF318Q5VUA4 2279 aa9.36□□□□□ -0.91
HERPUD2-206ENST00000438224 ZDBF2Q9HCK1 2354 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 TISP43B9A030 160 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 K7ENM7 598 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 C2CD2LO14523 706 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 SPTLC2O15270 562 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 FAM189A1O60320 539 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 FAM13AO94988 1023 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 SOD2P04179 222 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 MCF2P10911 925 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 HARSP12081 509 aaKnown RBP9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 CA8P35219 290 aa9.35□□□□□ -0.91
HERPUD2-206ENST00000438224 DDIT3P35638 169 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms