RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ARHGEF37A1IGU5 675 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 ZNF233A6NK53 670 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 NT5C1B-RDH14C9J2C7 533 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 PDXKO00764 312 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 FSCN2O14926 492 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 CALUO43852 315 aaPredicted RBP15.9■□□□□ 0.14
LIMS1-206ENST00000414829 B3GAT3O94766 335 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 SOD2P04179 222 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 CTSAP10619 480 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 ACOT2P49753 483 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 STK4Q13043 487 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 PNOCQ13519 176 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 MYBPC2Q14324 1141 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 TMEM132DQ14C87 1099 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 SKIV2LQ15477 1246 aaKnown RBP15.9■□□□□ 0.14
LIMS1-206ENST00000414829 NAB2Q15742 525 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 COBLL1Q53SF7 1204 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 KIAA1841Q6NSI8 718 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 DCLRE1AQ6PJP8 1040 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 USP37Q86T82 979 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 BRSK2Q8IWQ3 736 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 SPATA20Q8TB22 786 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 TMEM174Q8WUU8 243 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 FAM212AQ96EL1 285 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 CBWD1Q9BRT8 395 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 HERC2P3Q9BVR0 1158 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 ZBP1Q9H171 429 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 MRPL17Q9NRX2 175 aaKnown RBP15.9■□□□□ 0.14
LIMS1-206ENST00000414829 MARCH5Q9NX47 278 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 HSPBP1Q9NZL4 362 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 COG5Q9UP83 839 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 IRAK3Q9Y616 596 aa15.9■□□□□ 0.14
LIMS1-206ENST00000414829 TISP43B9A030 160 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 B4GALT3O60512 393 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 GADD45BO75293 160 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-206ENST00000414829 RPL13P26373 211 aaKnown RBP15.89■□□□□ 0.13
LIMS1-206ENST00000414829 TNFSF9P41273 254 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 AAK1Q2M2I8 961 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 USP41Q3LFD5 358 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 SEZ6Q53EL9 994 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-206ENST00000414829 FUT10Q6P4F1 479 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 ELMSAN1Q6PJG2 1045 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 TMEM173Q86WV6 379 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-206ENST00000414829 XXYLT1Q8NBI6 393 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 CACTINQ8WUQ7 758 aaKnown RBP15.89■□□□□ 0.13
LIMS1-206ENST00000414829 EMILIN2Q9BXX0 1053 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.89■□□□□ 0.13
LIMS1-206ENST00000414829 NUB1Q9Y5A7 615 aa15.89■□□□□ 0.13
LIMS1-206ENST00000414829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.88■□□□□ 0.13
LIMS1-206ENST00000414829 LACTBL1A8MY62 500 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 PODXLO00592 558 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 TGFB1I1O43294 461 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 KIF4AO95239 1232 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 LRPAP1P30533 357 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 GLUD2P49448 558 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 UPP1Q16831 310 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 TCEAL5Q5H9L2 206 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 ZBTB41Q5SVQ8 909 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 PLPP4Q5VZY2 271 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 PPFIBP1Q86W92 1011 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 SLC9A9Q8IVB4 645 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 MRPL43Q8N983 215 aaKnown RBP15.88■□□□□ 0.13
LIMS1-206ENST00000414829 TRIML1Q8N9V2 468 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 SAAL1Q96ER3 474 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 FBXL18Q96ME1 805 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 ZMAT2Q96NC0 199 aaKnown RBP15.88■□□□□ 0.13
LIMS1-206ENST00000414829 TLE6Q9H808 572 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 TRAF3IP3Q9Y228 551 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
LIMS1-206ENST00000414829 PCDHA5Q9Y5H7 936 aa15.88■□□□□ 0.13
LIMS1-206ENST00000414829 PSMA7O14818 248 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 EXOC3O60645 756 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 DNAJB1P25685 340 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 CA8P35219 290 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 HOXD13P35453 343 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 CYP2J2P51589 502 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 CLCNKBP51801 687 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 CAMK1Q14012 370 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 SNRNP35Q16560 246 aaKnown RBP15.87■□□□□ 0.13
LIMS1-206ENST00000414829 NFIL3Q16649 462 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 SPATA1Q5VX52 437 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 JADE1Q6IE81 842 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-206ENST00000414829 RNF168Q8IYW5 571 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-206ENST00000414829 NOC3LQ8WTT2 800 aaKnown RBP15.87■□□□□ 0.13
LIMS1-206ENST00000414829 BCL7CQ8WUZ0 217 aaPredicted RBP15.87■□□□□ 0.13
LIMS1-206ENST00000414829 FNBP1Q96RU3 617 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 TSG101Q99816 390 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 PCIF1Q9H4Z3 704 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 THEGQ9P2T0 379 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 DPP7Q9UHL4 492 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 FRMD4BQ9Y2L6 1034 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 TCHHQ07283 1943 aa15.87■□□□□ 0.13
LIMS1-206ENST00000414829 NLRC5Q86WI3 1866 aa15.86■□□□□ 0.13
LIMS1-206ENST00000414829 SYN3O14994 580 aa15.86■□□□□ 0.13
LIMS1-206ENST00000414829 CSPG5O95196 566 aa15.86■□□□□ 0.13
LIMS1-206ENST00000414829 MBD3O95983 291 aa15.86■□□□□ 0.13
LIMS1-206ENST00000414829 C1RP00736 705 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms