RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SLC27A2O14975 620 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 NPC1O15118 1278 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 SGTAO43765 313 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 PRLP01236 227 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 POLBP06746 335 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 KITP10721 976 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 GSPT1P15170 499 aaKnown RBP5.7□□□□□ -1.5
LSM5-205ENST00000409952 XBP1P17861 261 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 IGFBP6P24592 240 aaPredicted RBP5.7□□□□□ -1.5
LSM5-205ENST00000409952 CNTFP26441 200 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 SERPINF1P36955 418 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 RAD52P43351 418 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 EPHB3P54753 998 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 CHRNA2Q15822 529 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 FBXO47Q5MNV8 452 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 GPATCH4Q5T3I0 446 aaKnown RBP5.7□□□□□ -1.5
LSM5-205ENST00000409952 STEAP3Q658P3 488 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 ITPRIPL1Q6GPH6 555 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 SLFN12LQ6IEE8 588 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 JMJD6Q6NYC1 403 aaPredicted RBP5.7□□□□□ -1.5
LSM5-205ENST00000409952 UNQ6494/PRO21346Q6UXR6 183 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 IGDCC3Q8IVU1 814 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 LRRC56Q8IYG6 542 aaPredicted RBP5.7□□□□□ -1.5
LSM5-205ENST00000409952 ATP11CQ8NB49 1132 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 FANCBQ8NB91 859 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 NETO2Q8NC67 525 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 C3orf20Q8ND61 904 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 HIPK4Q8NE63 616 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 MZB1Q8WU39 189 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 SUCLG2Q96I99 432 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 FAM167BQ9BTA0 163 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 BRIP1Q9BX63 1249 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 STK31Q9BXU1 1019 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 EPB41L4AQ9HCS5 686 aaPredicted RBP5.7□□□□□ -1.5
LSM5-205ENST00000409952 HELLSQ9NRZ9 838 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 MYO1AQ9UBC5 1043 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 SCOCQ9UIL1 159 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 SIK3Q9Y2K2 1263 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 MYPNQ86TC9 1320 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 A0A1W2PQ27 194 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 A0A1W2PQ64 194 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 A0A1W2PQC6 194 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 A0A1W2PQD8 194 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 LRRC14BA6NHZ5 514 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 FAM171A2A8MVW0 826 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 NUDT19A8MXV4 375 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 GOLGA6L22H0YM25 854 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 HNRNPDLO14979 420 aaKnown RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 ARIH2O95376 493 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 TBX18O95935 607 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 CELA3BP08861 270 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 CKMT1AP12532 417 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 FGFR2P21802 821 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 SUMO3P55854 103 aaPredicted RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 SLC6A3Q01959 620 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 ROM1Q03395 351 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 MGAT2Q10469 447 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 PLS1Q14651 629 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 SPECC1Q5M775 1068 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 BICRALQ6AI39 1079 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 LCNL1Q6ZST4 164 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 FAM43BQ6ZT52 329 aaPredicted RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 HEATR3Q7Z4Q2 680 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 RBM12BQ8IXT5 1001 aaKnown RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 LZTR1Q8N653 840 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 PHOSPHO1Q8TCT1 267 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 CENPIQ92674 756 aaPredicted RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 TSPAN17Q96FV3 270 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 SIGLEC10Q96LC7 697 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 BARD1Q99728 777 aaKnown RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 FOXB1Q99853 325 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 C7orf25Q9BPX7 421 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 HEPHQ9BQS7 1158 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 NUDT16L1Q9BRJ7 211 aaKnown RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 CENPOQ9BU64 300 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 LSM14BQ9BX40 385 aaKnown RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 PDGFDQ9GZP0 370 aaPredicted RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 ALDH8A1Q9H2A2 487 aaPredicted RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 PRKRIP1Q9H875 184 aaPredicted RBP5.69□□□□□ -1.5
LSM5-205ENST00000409952 SIRT5Q9NXA8 310 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 DENND2AQ9ULE3 1009 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 PCDHA13Q9Y5I0 950 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 RPGRIP1LQ68CZ1 1315 aa5.69□□□□□ -1.5
LSM5-205ENST00000409952 TISP43B9A030 160 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 B9A039 149 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 HOXC11O43248 304 aaPredicted RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 PCDH8O95206 1070 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 TYRP14679 529 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 NPR1P16066 1061 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 EN2P19622 333 aaPredicted RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 TACR1P25103 407 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 LIFRP42702 1097 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 GPR15P49685 360 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 CLNS1AP54105 237 aaKnown RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 NAP1L1P55209 391 aaKnown RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
LSM5-205ENST00000409952 PPP3CAQ08209 521 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 SPARCL1Q14515 664 aa5.68□□□□□ -1.5
LSM5-205ENST00000409952 SSPNQ14714 243 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms