RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 EMC10Q5UCC4 262 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 AGBL4Q5VU57 503 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 SPOCD1Q6ZMY3 1216 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 APBB1IPQ7Z5R6 666 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF354CQ86Y25 554 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 TRMT2AQ8IZ69 625 aaKnown RBP5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 SPATA5Q8NB90 893 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 NT5C1BQ96P26 610 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 CRB3Q9BUF7 120 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 TMEM168Q9H0V1 697 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 SLC6A15Q9H2J7 730 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 AFF4Q9UHB7 1163 aaKnown RBP5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 CPA4Q9UI42 421 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZDHHC8Q9ULC8 765 aa5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 RBM8AQ9Y5S9 174 aaKnown RBP5.75□□□□□ -1.49
HMGB3P18-201ENST00000406327 POM121BA6NF01 834 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 DBX1A6NMT0 343 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 TOX4O94842 621 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 FGAP02671 866 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 AMY1AP04745 511 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 CYP1A1P04798 512 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 KITP10721 976 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 MTHFD1P11586 935 aaKnown RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 PAX3P23760 479 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 PRDX5P30044 214 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 PPM1AP35813 382 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 TECP42680 631 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 CCT5P48643 541 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 PIK3CGP48736 1102 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 CAP1Q01518 475 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 HABP2Q14520 560 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF572Q7Z3I7 529 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 KLHL36Q8N4N3 616 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 CCDC33Q8N5R6 958 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 AOPEPQ8N6M6 819 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 NUDT10Q8NFP7 164 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 OR6B3Q8NGW1 331 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 CCT6BQ92526 530 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 RAB24Q969Q5 203 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 ARL8AQ96BM9 186 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 NUDT11Q96G61 164 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 LTV1Q96GA3 475 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 EIF2AQ9BY44 585 aaKnown RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 C11orf54Q9H0W9 315 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 MRPL46Q9H2W6 279 aaKnown RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 RLIMQ9NVW2 624 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 GPRC5BQ9NZH0 403 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 FNIP2Q9P278 1114 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 CEP83Q9Y592 693 aa5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 MORC2Q9Y6X9 1032 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P18-201ENST00000406327 MROH2BQ7Z745 1585 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 C9orf118A6NHY6 69 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 LRRC10BA6NIK2 292 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 NT5C1B-RDH14C9J2C7 533 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 ADAMTS3O15072 1205 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 FGF18O76093 207 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 CD1AP06126 327 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 NPR1P16066 1061 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 TSHRP16473 764 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 FLT3LGP49771 235 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 MAPK10P53779 464 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 BPIFB4P59827 614 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 DLG4P78352 724 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 MXRA7P84157 204 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 FMO1Q01740 532 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 ICA1Q05084 483 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 PABPC1LQ4VXU2 614 aaKnown RBP5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 CIAPIN1Q6FI81 312 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 PGBD2Q6P3X8 592 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZNF783Q6ZMS7 281 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 PRR23BQ6ZRT6 265 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 USP30Q70CQ3 517 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 PLXDC1Q8IUK5 500 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 ZGPATQ8N5A5 531 aaKnown RBP5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 NLGN4YQ8NFZ3 816 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 FNIP1Q8TF40 1166 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 YTHDC1Q96MU7 727 aaKnown RBP5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 BRIP1Q9BX63 1249 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 LDAHQ9H6V9 325 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 MSL2Q9HCI7 577 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 ING3Q9NXR8 418 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 CFAP97Q9P2B7 532 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 PCDHA1Q9Y5I3 950 aa5.73□□□□□ -1.49
HMGB3P18-201ENST00000406327 C2orf78A6NCI8 922 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 F2RL2O00254 374 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 RFXAPO00287 272 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 APOL1O14791 398 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 NBNO60934 754 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 GNAI2P04899 355 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 ABCB4P21439 1286 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 GRK6P43250 576 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 KCNJ5P48544 419 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 SUMO3P55854 103 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 BIRC3Q13489 604 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 STARD3Q14849 445 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 RALBP1Q15311 655 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 MLANAQ16655 118 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 FAM26FQ5R3K3 315 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 PRAMEF14Q5SWL7 426 aa5.72□□□□□ -1.49
HMGB3P18-201ENST00000406327 OTUD7BQ6GQQ9 843 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms