RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SV2AQ7L0J3 742 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 CCDC42Q96M95 316 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 STK33Q9BYT3 514 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 PDZD7Q9H5P4 517 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 NHEJ1Q9H9Q4 299 aaPredicted RBP22.69■■□□□ 1.22
TPM1-208ENST00000404484 PDE11AQ9HCR9 933 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 ADGRG1Q9Y653 693 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 BZW2Q9Y6E2 419 aaKnown RBP22.69■■□□□ 1.22
TPM1-208ENST00000404484 LTBP2Q14767 1821 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 SSU72P8A0A1W2PR75 194 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 ZC3H11AO75152 810 aaKnown RBP eCLIP22.68■■□□□ 1.22
TPM1-208ENST00000404484 IL18RAPO95256 599 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 CCDC172P0C7W6 258 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 ARF4P18085 180 aaPredicted RBP22.68■■□□□ 1.22
TPM1-208ENST00000404484 STAT1P42224 750 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 EPHB4P54760 987 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 JAM2P57087 298 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 KRT83P78385 493 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 ZBTB41Q5SVQ8 909 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 EEF1DP3Q658K8 133 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 CATSPER4Q7RTX7 472 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 WDR49Q8IV35 697 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 POP1Q99575 1024 aaKnown RBP22.68■■□□□ 1.22
TPM1-208ENST00000404484 DEF6Q9H4E7 631 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 TOPORSQ9NS56 1045 aaPredicted RBP22.68■■□□□ 1.22
TPM1-208ENST00000404484 RAB20Q9NX57 234 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 DNAJC12Q9UKB3 198 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 GINS2Q9Y248 185 aa22.68■■□□□ 1.22
TPM1-208ENST00000404484 A0A1W2PPC1 479 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 USP27XA6NNY8 438 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 M0QZ92 97 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 TUBB4AP04350 444 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 CLTAP09496 248 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 EIF4BP23588 611 aaKnown RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 AXLP30530 894 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 CRYBB1P53674 252 aaPredicted RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 ZNF200P98182 395 aaPredicted RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 TMEM62Q0P6H9 643 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 MAPK8IP2Q13387 824 aaPredicted RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 DCAF4L1Q3SXM0 396 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 ZACNQ401N2 412 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 C15orf39Q6ZRI6 1047 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 TDHQ8IZJ6 230 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 OSMRQ99650 979 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 RPF1Q9H9Y2 349 aaKnown RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 SZT2Q5T011 3432 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 A0A1B0GUA9 196 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 EIF3CLB5ME19 914 aaKnown RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 FERP16591 822 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 CCL23P55773 120 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 FPGSQ05932 587 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 TDRD12Q587J7 1177 aaKnown RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 THNSL1Q8IYQ7 743 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 NT5C1BQ96P26 610 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 EIF3CQ99613 913 aaKnown RBP22.67■■□□□ 1.22
TPM1-208ENST00000404484 DESI2Q9BSY9 194 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 ARHGAP20Q9P2F6 1191 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 NOD1Q9Y239 953 aa22.67■■□□□ 1.22
TPM1-208ENST00000404484 CSDE1O75534 798 aaKnown RBP22.66■■□□□ 1.22
TPM1-208ENST00000404484 CSF2RAP15509 400 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 ANXA13P27216 316 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 BIRC3Q13489 604 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 PTPN14Q15678 1187 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 DNTTIP2Q5QJE6 756 aaKnown RBP22.66■■□□□ 1.22
TPM1-208ENST00000404484 NOTUMQ6P988 496 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 TAS1R2Q8TE23 839 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 CPB2Q96IY4 423 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 WNT8AQ9H1J5 351 aa22.66■■□□□ 1.22
TPM1-208ENST00000404484 TRIP12Q14669 1992 aaPredicted RBP22.65■■□□□ 1.22
TPM1-208ENST00000404484 F8VZ95 297 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 C4BPAP04003 597 aaKnown RBP22.65■■□□□ 1.22
TPM1-208ENST00000404484 TNFSF9P41273 254 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 KLHL30Q0D2K2 578 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 SHHQ15465 462 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 SPA17Q15506 151 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 SEZ6Q53EL9 994 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 C9orf50Q5SZB4 431 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 PHLDB3Q6NSJ2 640 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.65■■□□□ 1.22
TPM1-208ENST00000404484 ENOSF1Q7L5Y1 443 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 RPAINQ86UA6 219 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 TMEM199Q8N511 208 aa22.65■■□□□ 1.22
TPM1-208ENST00000404484 AKR1B10O60218 316 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 SOX5P35711 763 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 EIF4A3P38919 411 aaKnown RBP22.64■■□□□ 1.22
TPM1-208ENST00000404484 PRKCIP41743 596 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 PIK3CAP42336 1068 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 MRPS6P82932 125 aaKnown RBP22.64■■□□□ 1.22
TPM1-208ENST00000404484 DRAP1Q14919 205 aaPredicted RBP22.64■■□□□ 1.22
TPM1-208ENST00000404484 ENOX2Q16206 610 aaKnown RBP22.64■■□□□ 1.22
TPM1-208ENST00000404484 WDR44Q5JSH3 913 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 HGSNATQ68CP4 663 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 GJB7Q6PEY0 223 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 NYAP1Q6ZVC0 841 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 C16orf59Q7L2K0 433 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 SERINC5Q86VE9 423 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 REXO1L1PQ8IX06 675 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 TXLNBQ8N3L3 684 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 ZNF516Q92618 1163 aa22.64■■□□□ 1.22
TPM1-208ENST00000404484 DHX38Q92620 1227 aaKnown RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms