RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SOX10P56693 466 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 SRRM1Q8IYB3 904 aaKnown RBP14.87□□□□□ -0.03
NUP98-204ENST00000397004 TMEM174Q8WUU8 243 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 TGS1Q96RS0 853 aaKnown RBP14.87□□□□□ -0.03
NUP98-204ENST00000397004 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 STK24Q9Y6E0 443 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 COL11A2P13942 1736 aaPredicted RBP14.87□□□□□ -0.03
NUP98-204ENST00000397004 ARHGEF35A5YM69 484 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 SSTR3P32745 418 aaPredicted RBP14.87□□□□□ -0.03
NUP98-204ENST00000397004 DACT2Q5SW24 774 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 FAM47EQ6ZV65 393 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 MAML1Q92585 1016 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 ASIC3Q9UHC3 531 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 EIF4E1BA6NMX2 242 aaKnown RBP14.87□□□□□ -0.03
NUP98-204ENST00000397004 TCF4P15884 667 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 MSH2P43246 934 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 MXI1P50539 228 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 MCCD1P59942 119 aaPredicted RBP14.87□□□□□ -0.03
NUP98-204ENST00000397004 CDR2Q01850 454 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 FASTKD3Q14CZ7 662 aaKnown RBP14.87□□□□□ -0.03
NUP98-204ENST00000397004 TAOK1Q7L7X3 1001 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 XXYLT1Q8NBI6 393 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 KLHL29Q96CT2 875 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 TMEM237Q96Q45 408 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 RXFP1Q9HBX9 757 aa14.87□□□□□ -0.03
NUP98-204ENST00000397004 UNGP13051 313 aaPredicted RBP14.86□□□□□ -0.03
NUP98-204ENST00000397004 CCNB1P14635 433 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 RBM5P52756 815 aaKnown RBP eCLIP14.86□□□□□ -0.03
NUP98-204ENST00000397004 PTK6Q13882 451 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 CRYMQ14894 314 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 CPA5Q8WXQ8 436 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 HOMER3Q9NSC5 361 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 TELO2Q9Y4R8 837 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 T-ENOLP0DO92 83 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 STAT2P52630 851 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 TAS2R40P59535 323 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 HP1BP3Q5SSJ5 553 aaPredicted RBP14.86□□□□□ -0.03
NUP98-204ENST00000397004 HAUS6Q7Z4H7 955 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 KCTD17Q8N5Z5 321 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 DYDC1Q8WWB3 177 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 PRMT6Q96LA8 375 aaPredicted RBP14.86□□□□□ -0.03
NUP98-204ENST00000397004 ZBTB21Q9ULJ3 1066 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 ARL2BPQ9Y2Y0 163 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 UMODL1Q5DID0 1318 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 GTF2BQ00403 316 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
NUP98-204ENST00000397004 C12orf56Q8IXR9 622 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 KCNH7Q9NS40 1196 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 KCND2Q9NZV8 630 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 ANAPC7Q9UJX3 599 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 CHKBQ9Y259 395 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 PIAS1O75925 651 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 CALCOCO2Q13137 446 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 MYBPC2Q14324 1141 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 ACAD10Q6JQN1 1059 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 PARD3BQ8TEW8 1205 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 RUNDC3BQ96NL0 473 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 RGS17Q9UGC6 210 aaPredicted RBP14.86□□□□□ -0.03
NUP98-204ENST00000397004 MTUS1Q9ULD2 1270 aa14.86□□□□□ -0.03
NUP98-204ENST00000397004 POLR2MP0CAP2 368 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 ZSCAN5DPP0CG00 497 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 RALAP11233 206 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 ITIH2P19823 946 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 GBP1P32455 592 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 PDE6BP35913 854 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 NAA25Q14CX7 972 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 CLUL1Q15846 466 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 ZYXQ15942 572 aaKnown RBP14.85□□□□□ -0.03
NUP98-204ENST00000397004 ATP13A4Q4VNC1 1196 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 SNF8Q96H20 258 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 MYLK2Q9H1R3 596 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 LGALS13Q9UHV8 139 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 KIF1CO43896 1103 aaKnown RBP14.85□□□□□ -0.03
NUP98-204ENST00000397004 SPAG7O75391 227 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 TCEA3O75764 348 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 SUN1O94901 812 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 GBP2P32456 591 aaPredicted RBP14.85□□□□□ -0.03
NUP98-204ENST00000397004 MTFR1Q15390 333 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 SNRNP35Q16560 246 aaKnown RBP14.85□□□□□ -0.03
NUP98-204ENST00000397004 KCNV2Q8TDN2 545 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 BSNDQ8WZ55 320 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 P4HA2O15460 535 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 PLS3P13797 630 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 PEX3P56589 373 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 CLEC16AQ2KHT3 1053 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 DENND1AQ8TEH3 1009 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 ZNF516Q92618 1163 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 FHDC1Q9C0D6 1143 aaPredicted RBP14.85□□□□□ -0.03
NUP98-204ENST00000397004 RANBP17Q9H2T7 1088 aaKnown RBP14.85□□□□□ -0.03
NUP98-204ENST00000397004 COQ4Q9Y3A0 265 aa14.85□□□□□ -0.03
NUP98-204ENST00000397004 ADGRA3Q8IWK6 1321 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 ETS1P14921 441 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 PLA2G4FQ68DD2 849 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 PAXIP1Q6ZW49 1069 aaPredicted RBP14.84□□□□□ -0.03
NUP98-204ENST00000397004 AGBL1Q96MI9 1066 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 ITGBL1O95965 494 aaPredicted RBP14.84□□□□□ -0.03
NUP98-204ENST00000397004 KLRC2P26717 231 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 DSG3P32926 999 aa14.84□□□□□ -0.03
NUP98-204ENST00000397004 MRPS9P82933 396 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms