RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 C5orf60A6NFR6 353 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 FOXO6A8MYZ6 492 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 TBX3O15119 743 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 PLA2G4BP0C869 781 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 HOXD10P28358 340 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 YWHABP31946 246 aaKnown RBP11.03□□□□□ -0.64
TUBB-208ENST00000396389 TNNC1P63316 161 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 PRKCEQ02156 737 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 TMEM62Q0P6H9 643 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 RPS6KA1Q15418 735 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 CCDC38Q502W7 563 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 XKR9Q5GH70 373 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 FIGNQ5HY92 759 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 FAM114A1Q8IWE2 563 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
TUBB-208ENST00000396389 CCDC197Q8NCU1 140 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 LARP4BQ92615 738 aaKnown RBP11.03□□□□□ -0.64
TUBB-208ENST00000396389 PCYT2Q99447 389 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 GPR20Q99678 358 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 RUSC1Q9BVN2 902 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 AZI2Q9H6S1 392 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 MLXIPLQ9NP71 852 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 ZNF302Q9NR11 478 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 SYNGAP1Q96PV0 1343 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 PLXNB2O15031 1838 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 CSDE1O75534 798 aaKnown RBP11.02□□□□□ -0.64
TUBB-208ENST00000396389 NOL4O94818 638 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 VIMP08670 466 aaKnown RBP11.02□□□□□ -0.64
TUBB-208ENST00000396389 HOXC6P09630 235 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 QARSP47897 775 aaKnown RBP11.02□□□□□ -0.64
TUBB-208ENST00000396389 STAT5BP51692 787 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 KRT76Q01546 638 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.64
TUBB-208ENST00000396389 PDIA5Q14554 519 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 FAM47CQ5HY64 1035 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 ANO5Q75V66 913 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 GPBP1Q86WP2 473 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 KSR1Q8IVT5 923 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 LRRC71Q8N4P6 559 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 METTL13Q8N6R0 699 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 ARMC2Q8NEN0 867 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 SPDYE1Q8NFV5 336 aaPredicted RBP11.02□□□□□ -0.64
TUBB-208ENST00000396389 TAF4BQ92750 862 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 CEP170P1Q96L14 293 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 DEFB118Q96PH6 123 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.64
TUBB-208ENST00000396389 LSM14BQ9BX40 385 aaKnown RBP11.02□□□□□ -0.64
TUBB-208ENST00000396389 VTA1Q9NP79 307 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 C15orf41Q9Y2V0 281 aa11.02□□□□□ -0.64
TUBB-208ENST00000396389 KRIT1O00522 736 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 DNAJC8O75937 253 aaPredicted RBP11.02□□□□□ -0.65
TUBB-208ENST00000396389 GH1P01241 217 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 MMEP08473 750 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 ACTN1P12814 892 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 ATP4AP20648 1035 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 RPA1P27694 616 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 LRRC14Q15048 493 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 MIS18BP1Q6P0N0 1132 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 ERICH1Q86X53 443 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 SAMD3Q8N6K7 520 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 MGARPQ8TDB4 240 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 SEPT1Q8WYJ6 367 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 KIFC3Q9BVG8 833 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 RNF208Q9H0X6 261 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 UNC93B1Q9H1C4 597 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 IKZF4Q9H2S9 585 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 MYMKA6NI61 221 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 UBOX5O94941 541 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 KIF4AO95239 1232 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 P4HBP07237 508 aaKnown RBP11.02□□□□□ -0.65
TUBB-208ENST00000396389 PSAPP07602 524 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 MYBP10242 640 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
TUBB-208ENST00000396389 MAN2A1Q16706 1144 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 DUSP28Q4G0W2 176 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 SFMBT2Q5VUG0 894 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 ABHD15Q6UXT9 468 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 RUFY4Q6ZNE9 571 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 RNF10Q8N5U6 811 aaKnown RBP11.02□□□□□ -0.65
TUBB-208ENST00000396389 MAGEC3Q8TD91 643 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 AK8Q96MA6 479 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 PYM1Q9BRP8 204 aaKnown RBP11.02□□□□□ -0.65
TUBB-208ENST00000396389 KDM4CQ9H3R0 1056 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 XPNPEP3Q9NQH7 507 aa11.02□□□□□ -0.65
TUBB-208ENST00000396389 SUPT20HL2P0C7V6 817 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 HSPA8P11142 646 aaKnown RBP11.01□□□□□ -0.65
TUBB-208ENST00000396389 CYBAP13498 195 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 EPHA7Q15375 998 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 ERMARDQ5T6L9 678 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 CAPRIN2Q6IMN6 1127 aaKnown RBP11.01□□□□□ -0.65
TUBB-208ENST00000396389 CENPPQ6IPU0 288 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 LRIG3Q6UXM1 1119 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 TMC3Q7Z5M5 1100 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 NELFCDQ8IXH7 590 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 SLC17A8Q8NDX2 589 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 DDX12PQ92771 950 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms