RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 THNSL1Q8IYQ7 743 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 RASGEF1CQ8N431 466 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
GPC3-202ENST00000394299 PPP1R13LQ8WUF5 828 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 ZNF653Q96CK0 615 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 FAM167AQ96KS9 214 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 NUP85Q9BW27 656 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 TRIM7Q9C029 511 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 CES2O00748 559 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 SART1O43290 800 aaKnown RBP16.18■□□□□ 0.18
GPC3-202ENST00000394299 COMTP21964 271 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 ARHGAP1Q07960 439 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 KCNV1Q6PIU1 500 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 RHOT2Q8IXI1 618 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 MORC4Q8TE76 937 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 GDF3Q9NR23 364 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 AMACRQ9UHK6 382 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 FAN1Q9Y2M0 1017 aa16.18■□□□□ 0.18
GPC3-202ENST00000394299 INO80B-WBP1J3KQ70 363 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 AGPSO00116 658 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 SYF2O95926 243 aaKnown RBP16.17■□□□□ 0.18
GPC3-202ENST00000394299 LDHAP00338 332 aaKnown RBP16.17■□□□□ 0.18
GPC3-202ENST00000394299 ACO1P21399 889 aaKnown RBP16.17■□□□□ 0.18
GPC3-202ENST00000394299 ZNF792Q3KQV3 632 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 EEF1DP3Q658K8 133 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 TMEM270Q6UE05 265 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 PASD1Q8IV76 773 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 TMEM192Q8IY95 271 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 CYFIP2Q96F07 1278 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 CGRRF1Q99675 332 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
GPC3-202ENST00000394299 INO80BQ9C086 356 aaPredicted RBP16.17■□□□□ 0.18
GPC3-202ENST00000394299 SMARCAD1Q9H4L7 1026 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 VPS18Q9P253 973 aa16.17■□□□□ 0.18
GPC3-202ENST00000394299 ABLIM1O14639 778 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 TOM1L1O75674 476 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 ABCD1P33897 745 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 GGCXP38435 758 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 GUCY2FP51841 1108 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 MAPK6Q16659 721 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 GLE1Q53GS7 698 aaKnown RBP16.16■□□□□ 0.18
GPC3-202ENST00000394299 ACAD10Q6JQN1 1059 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 AFG1LQ8WV93 481 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 MRPL4Q9BYD3 311 aaKnown RBP16.16■□□□□ 0.18
GPC3-202ENST00000394299 MTMR12Q9C0I1 747 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 ERVK-5Q9HDB9 667 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 INSRRP14616 1297 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 TNNC1P63316 161 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 CUL2Q13617 745 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 NCOA4Q13772 614 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 CLEC16AQ2KHT3 1053 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 CDCA2Q69YH5 1023 aaPredicted RBP16.16■□□□□ 0.18
GPC3-202ENST00000394299 ZNF564Q8TBZ8 553 aaPredicted RBP16.16■□□□□ 0.18
GPC3-202ENST00000394299 KCNN1Q92952 543 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
GPC3-202ENST00000394299 PCDHB4Q9Y5E5 795 aa16.16■□□□□ 0.18
GPC3-202ENST00000394299 ASB14A6NK59 587 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 ZC3H11AO75152 810 aaKnown RBP eCLIP16.15■□□□□ 0.189e-7■■□□□ 12.8
GPC3-202ENST00000394299 EFNA5P52803 228 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 NOP14P78316 857 aaKnown RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 MXD4Q14582 209 aaPredicted RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 ZPBP2Q6X784 338 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 DNAH12Q6ZR08 3092 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 IFT20Q8IY31 132 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 TCP11Q8WWU5 503 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 PTPN18Q99952 460 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 CNOT8Q9UFF9 292 aaKnown RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 KIAA0391O15091 583 aaKnown RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 SNAI1O95863 264 aaPredicted RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 LGALS2P05162 132 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 CYP1A2P05177 515 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 UNGP13051 313 aaPredicted RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 MYL6P60660 151 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 DMTNQ08495 405 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 ZNF394Q53GI3 561 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 DAB2IPQ5VWQ8 1189 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 PNMA8AQ86V59 439 aaPredicted RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 BRSK2Q8IWQ3 736 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 ZBTB8OSQ8IWT0 167 aa16.15■□□□□ 0.18
GPC3-202ENST00000394299 DIS3Q9Y2L1 958 aaKnown RBP16.15■□□□□ 0.18
GPC3-202ENST00000394299 EVPLQ92817 2033 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 TTI1O43156 1089 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 HBP1O60381 514 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 HADHBP55084 474 aaKnown RBP16.14■□□□□ 0.17
GPC3-202ENST00000394299 TMEM132AQ24JP5 1023 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 ZDHHC14Q8IZN3 488 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 PCDHB2Q9Y5E7 798 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 C22orf31O95567 290 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 VTNP04004 478 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 CLTAP09496 248 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 CETPP11597 493 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 CD58P19256 250 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 RRM1P23921 792 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 EPHB4P54760 987 aa16.14■□□□□ 0.17
GPC3-202ENST00000394299 TFAMQ00059 246 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms