RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 COPB2P35606 906 aa27.44■■□□□ 1.98
SMARCD3-203ENST00000392811 KCTD2Q14681 263 aa27.44■■□□□ 1.98
SMARCD3-203ENST00000392811 KCNV1Q6PIU1 500 aa27.44■■□□□ 1.98
SMARCD3-203ENST00000392811 PIK3R5Q8WYR1 880 aa27.44■■□□□ 1.98
SMARCD3-203ENST00000392811 APOBEC3GQ9HC16 384 aaKnown RBP27.44■■□□□ 1.98
SMARCD3-203ENST00000392811 PPME1Q9Y570 386 aa27.44■■□□□ 1.98
SMARCD3-203ENST00000392811 GOLGA6L10A0A0M3HER8 536 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 GOLGA6CA6NDK9 693 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 GOLGA8KD6RF30 607 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 NOP56O00567 594 aaKnown RBP27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 LGR5O75473 907 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 GOLGA6DP0CG33 693 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 UNGP13051 313 aaPredicted RBP27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 HSPA9P38646 679 aaKnown RBP27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 MKRN4PQ13434 485 aaPredicted RBP27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 IER5Q5VY09 327 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 ZPBP2Q6X784 338 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 OR5B17Q8NGF7 314 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 NEUROG2Q9H2A3 272 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 GOLGA6AQ9NYA3 693 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 ZBTB42B2RXF5 422 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 DAPK3O43293 454 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 CAPN2P17655 700 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 ACO1P21399 889 aaKnown RBP27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 OSBPP22059 807 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 CUL2Q13617 745 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 ZNF677Q86XU0 584 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 FBXO16Q8IX29 292 aaPredicted RBP27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 SEC14L1Q92503 715 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 CCDC113Q9H0I3 377 aa27.43■■□□□ 1.98
SMARCD3-203ENST00000392811 CLDN3O15551 220 aa27.42■■□□□ 1.98
SMARCD3-203ENST00000392811 MSCO60682 206 aa27.42■■□□□ 1.98
SMARCD3-203ENST00000392811 EFNA5P52803 228 aa27.42■■□□□ 1.98
SMARCD3-203ENST00000392811 BPIFB4P59827 614 aa27.42■■□□□ 1.98
SMARCD3-203ENST00000392811 PPP2R5EQ16537 467 aa27.42■■□□□ 1.98
SMARCD3-203ENST00000392811 GPAT2Q6NUI2 795 aa27.42■■□□□ 1.98
SMARCD3-203ENST00000392811 SPOPO43791 374 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 LAMTOR4Q0VGL1 99 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 WDR78Q5VTH9 848 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 USP50Q70EL3 339 aaPredicted RBP27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 FASTKD5Q7L8L6 764 aaKnown RBP27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 LRRC71Q8N4P6 559 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 ATP8B4Q8TF62 1192 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 SRGAP2CP0DJJ0 459 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 YBX3P16989 372 aaKnown RBP eCLIP27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 CTNNA1P35221 906 aaKnown RBP27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 PPFIA1Q13136 1202 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 CDCA2Q69YH5 1023 aaPredicted RBP27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 PLPPR4Q7Z2D5 763 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 ZBTB33Q86T24 672 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 FAM76AQ8TAV0 307 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 TCP11Q8WWU5 503 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 ARL8AQ96BM9 186 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 TRIM51Q9BSJ1 452 aa27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 MRPL4Q9BYD3 311 aaKnown RBP27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 UTP11Q9Y3A2 253 aaKnown RBP27.41■■□□□ 1.98
SMARCD3-203ENST00000392811 CTNNA2P26232 953 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 TNFSF9P41273 254 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 PLCB4Q15147 1175 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 CCDC62Q6P9F0 684 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 DHX37Q8IY37 1157 aaKnown RBP27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 MCOLN2Q8IZK6 566 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 CPA5Q8WXQ8 436 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 SPATA33Q96N06 139 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 PCDHA3Q9Y5H8 950 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 MCM3APO60318 1980 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 IGKV6-21A0A0C4DH24 114 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 CCDC66A2RUB6 948 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 FAM189A1O60320 539 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 TOM1L1O75674 476 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 CLTAP09496 248 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 PYGMP11217 842 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 DR1Q01658 176 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 TTMPQ5BVD1 217 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 BRSK2Q8IWQ3 736 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 RNF149Q8NC42 400 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 COPS5Q92905 334 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 DPH5Q9H2P9 285 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 NUB1Q9Y5A7 615 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 PCDHB4Q9Y5E5 795 aa27.4■■□□□ 1.98
SMARCD3-203ENST00000392811 UMODL1Q5DID0 1318 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 GAS2O43903 313 aaKnown RBP27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 HSPA6P17066 643 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 EPHX2P34913 555 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 NOP14P78316 857 aaKnown RBP27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 MXD4Q14582 209 aaPredicted RBP27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 TMEM63BQ5T3F8 832 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 SEL1L2Q5TEA6 688 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 SCARA3Q6AZY7 606 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 ZC3H15Q8WU90 426 aaKnown RBP27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 TCHPQ9BT92 498 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 MROH8Q9H579 483 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 FAM114A2Q9NRY5 505 aa27.39■■□□□ 1.98
SMARCD3-203ENST00000392811 KRT14P02533 472 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 CYP1A1P04798 512 aaPredicted RBP27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 NCOA4Q13772 614 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 ACO2Q99798 780 aaKnown RBP27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 AVENQ9NQS1 362 aaPredicted RBP27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 PRKCBP05771 671 aa27.38■■□□□ 1.97
SMARCD3-203ENST00000392811 TMEM270Q6UE05 265 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms