RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ELMO3Q96BJ8 720 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 MKNK1Q9BUB5 465 aa18.9■□□□□ 0.62
SQSTM1-202ENST00000389805 RBBP6Q7Z6E9 1792 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 GOLGA8IPA6NC78 632 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 GOLGA8JA6NMD2 632 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 GCLMP48507 274 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 PPP3CAQ08209 521 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 AGBL3Q8NEM8 1001 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 ARHGEF26Q96DR7 871 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 ARL2BPQ9Y2Y0 163 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 EMSYQ7Z589 1322 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 LUC7L3O95232 432 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 NEFHP12036 1026 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 RAB27AP51159 221 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 ARMC3Q5W041 872 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 PLA2G4FQ68DD2 849 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 FAM47EQ6ZV65 393 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 STXBP4Q6ZWJ1 553 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 ASRGL1Q7L266 308 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 PAPOLBQ9NRJ5 636 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 APEX2Q9UBZ4 518 aa18.89■□□□□ 0.61
SQSTM1-202ENST00000389805 KCNJ1P48048 391 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 NFIL3Q16649 462 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 LMO3Q8TAP4 145 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 ZBED3Q96IU2 234 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 KIFC3Q9BVG8 833 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 KCND2Q9NZV8 630 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 SLC16A4O15374 487 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 MARCKSL1P49006 195 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 MTMR2Q13614 643 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 PRAMEF18Q5VWM3 479 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 PLEKHO2Q8TD55 490 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 SLC20A1Q8WUM9 679 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 KAT5Q92993 513 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 TEPSINQ96N21 525 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 RXFP1Q9HBX9 757 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 UBE2TQ9NPD8 197 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 ACP6Q9NPH0 428 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 LARSQ9P2J5 1176 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 MTRF1LQ9UGC7 380 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 TBK1Q9UHD2 729 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 UBIAD1Q9Y5Z9 338 aa18.88■□□□□ 0.61
SQSTM1-202ENST00000389805 ANKRD33BA6NCL7 494 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 YWHABP31946 246 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 QARSP47897 775 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 PAPOLAP51003 745 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 PEX3P56589 373 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 SOX10P56693 466 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 MPP2Q14168 576 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 TTC27Q6P3X3 843 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 SAMD7Q7Z3H4 446 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 ARHGEF19Q8IW93 802 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 GBP7Q8N8V2 638 aaPredicted RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 ANKLE1Q8NAG6 615 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 POP1Q99575 1024 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 RASAL2Q9UJF2 1139 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 RIPK3Q9Y572 518 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 MUTP22033 750 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 SPDYCQ5MJ68 293 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 TGS1Q96RS0 853 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 SYT15Q9BQS2 421 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 SLC38A10Q9HBR0 1119 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 TELO2Q9Y4R8 837 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 TESPA1A2RU30 521 aaPredicted RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 SORBS3O60504 671 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 VSTM1Q6UX27 236 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 ZDHHC14Q8IZN3 488 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 KRT35Q92764 455 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 PAIP2Q9BPZ3 127 aaKnown RBP18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 THAP2Q9H0W7 228 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 DEFB129Q9H1M3 183 aa18.87■□□□□ 0.61
SQSTM1-202ENST00000389805 PFASO15067 1338 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 FAM187AA6NFU0 413 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 CCNE2O96020 404 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 BCRP11274 1271 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 TARSP26639 723 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 PGM5Q15124 567 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 CIAPIN1Q6FI81 312 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 HAUS6Q7Z4H7 955 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 LONP2Q86WA8 852 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 CTNNBL1Q8WYA6 563 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 RMDN3Q96TC7 470 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 KLHL14Q9P2G3 628 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 LRRD1A4D1F6 860 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 LIN7AO14910 233 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 FESP07332 822 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 VCAM1P19320 739 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 PTGIRP43119 386 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 C1orf220Q5T0J3 134 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 CGB2Q6NT52 195 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 ZNF746Q6NUN9 644 aaPredicted RBP18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 ECHDC2Q86YB7 292 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 FBF1Q8TES7 1133 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 TEKT4Q8WW24 435 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 SYT11Q9BT88 431 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms