RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 CLIC2O15247 247 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 THP07101 528 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 CYP2J2P51589 502 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 PPP2R3AQ06190 1150 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 NAB2Q15742 525 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 XKR4Q5GH76 650 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 ZNF658Q5TYW1 1059 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-201ENST00000381342 CRELD2Q6UXH1 353 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-201ENST00000381342 ALKAL1Q6UXT8 129 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 HS2ST1Q7LGA3 356 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 TMEM173Q86WV6 379 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-201ENST00000381342 COLGALT2Q8IYK4 626 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 SLC39A11Q8N1S5 342 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 BCL7CQ8WUZ0 217 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-201ENST00000381342 FAM212AQ96EL1 285 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 PPP1R10Q96QC0 940 aaKnown RBP17.59■□□□□ 0.41
SNRPB-201ENST00000381342 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 RPF1Q9H9Y2 349 aaKnown RBP17.59■□□□□ 0.41
SNRPB-201ENST00000381342 HSPBP1Q9NZL4 362 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 LZTS1Q9Y250 596 aa17.59■□□□□ 0.41
SNRPB-201ENST00000381342 SMIM28A0A1B0GU29 152 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 TTC26A0AVF1 554 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 CASTOR2A6NHX0 329 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 F8W810 466 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 H3BQ06 376 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-201ENST00000381342 GALTP07902 379 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 MCM4P33991 863 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 OR1G1P47890 313 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 NDUFV1P49821 464 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 PLCB3Q01970 1234 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 SPAG1Q07617 926 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 HYAL1Q12794 435 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 PTCRAQ6ISU1 281 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-201ENST00000381342 GUF1Q8N442 669 aaKnown RBP17.58■□□□□ 0.4
SNRPB-201ENST00000381342 RABGGTAQ92696 567 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 C18orf25Q96B23 403 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-201ENST00000381342 TMEM169Q96HH4 297 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 PAAF1Q9BRP4 392 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 TMEM175Q9BSA9 504 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 TLE6Q9H808 572 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 ENTPD7Q9NQZ7 604 aa17.58■□□□□ 0.4
SNRPB-201ENST00000381342 PRG3Q9Y2Y8 225 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-201ENST00000381342 LACTBL1A8MY62 500 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 NRP1O14786 923 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 EXTL3O43909 919 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 KIF20AO95235 890 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 KCNE1P15382 129 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 PRCPP42785 496 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 WNT7BP56706 349 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 SOX4Q06945 474 aaPredicted RBP17.57■□□□□ 0.4
SNRPB-201ENST00000381342 TUSC3Q13454 348 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 TMC7Q7Z402 723 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 RBM23Q86U06 439 aaKnown RBP17.57■□□□□ 0.4
SNRPB-201ENST00000381342 BRSK2Q8IWQ3 736 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 GPD1LQ8N335 351 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 TMEM130Q8N3G9 435 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 KIF12Q96FN5 646 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 CDCA3Q99618 268 aaPredicted RBP17.57■□□□□ 0.4
SNRPB-201ENST00000381342 PLEKHA5Q9HAU0 1116 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 NGRNQ9NPE2 291 aaKnown RBP17.57■□□□□ 0.4
SNRPB-201ENST00000381342 RBAKQ9NYW8 714 aaPredicted RBP17.57■□□□□ 0.4
SNRPB-201ENST00000381342 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 REV3LO60673 3130 aa17.57■□□□□ 0.4
SNRPB-201ENST00000381342 TCF20Q9UGU0 1960 aaKnown RBP17.57■□□□□ 0.4
SNRPB-201ENST00000381342 LDHAP00338 332 aaKnown RBP17.56■□□□□ 0.4
SNRPB-201ENST00000381342 NFICP08651 508 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 SRGAP2BP0DMP2 458 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 BMP6P22004 513 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 DNAJB1P25685 340 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 CA8P35219 290 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 IRS1P35568 1242 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 NRIP1P48552 1158 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 SNRPFP62306 86 aaKnown RBP17.56■□□□□ 0.4
SNRPB-201ENST00000381342 CAMK1Q14012 370 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 MORC3Q14149 939 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 JADE1Q6IE81 842 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 CBWD2Q8IUF1 395 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 C12orf56Q8IXR9 622 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.56■□□□□ 0.4
SNRPB-201ENST00000381342 GOLGA5Q8TBA6 731 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 MARCH5Q9NX47 278 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
SNRPB-201ENST00000381342 FAN1Q9Y2M0 1017 aa17.56■□□□□ 0.4
SNRPB-201ENST00000381342 EYSQ5T1H1 3165 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 TULP1O00294 542 aaPredicted RBP17.55■□□□□ 0.4
SNRPB-201ENST00000381342 PDXKO00764 312 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 KIAA0391O15091 583 aaKnown RBP17.55■□□□□ 0.4
SNRPB-201ENST00000381342 MBD3O95983 291 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 NR3C1P04150 777 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 ADRB2P07550 413 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 CD44P16070 742 aaKnown RBP17.55■□□□□ 0.4
SNRPB-201ENST00000381342 ADAM15Q13444 863 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 COBLL1Q53SF7 1204 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 PLPP4Q5VZY2 271 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 EFHBQ8N7U6 833 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 HASPINQ8TF76 798 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 IGSF21Q96ID5 467 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 NECAB3Q96P71 396 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms