RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 MRPS17Q9Y2R5 130 aaKnown RBP17.61■□□□□ 0.41
VCX3A-201ENST00000381089 BACE2Q9Y5Z0 518 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 CDY1Q9Y6F8 540 aa17.61■□□□□ 0.41
VCX3A-201ENST00000381089 OTOGLQ3ZCN5 2332 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 FRYLO94915 3013 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 LRRN2O75325 713 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 MED24O75448 989 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 RPA1P27694 616 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 ELF1P32519 619 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 FOSBP53539 338 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 YARSP54577 528 aaKnown RBP17.6■□□□□ 0.41
VCX3A-201ENST00000381089 NAB2Q15742 525 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 HAUS3Q68CZ6 603 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 GPR161Q8N6U8 529 aaKnown RBP17.6■□□□□ 0.41
VCX3A-201ENST00000381089 CCDC113Q9H0I3 377 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 LTB4R2Q9NPC1 389 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 DNMT3BQ9UBC3 853 aaKnown RBP17.6■□□□□ 0.41
VCX3A-201ENST00000381089 PCDHGA2Q9Y5H1 932 aa17.6■□□□□ 0.41
VCX3A-201ENST00000381089 TTLL13PA6NNM8 815 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 ECI2O75521 394 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 LRG1P02750 347 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 SDHBP21912 280 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 MUTP22033 750 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 CLCNKBP51801 687 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 CSTF1Q05048 431 aaKnown RBP17.59■□□□□ 0.41
VCX3A-201ENST00000381089 ORC2Q13416 577 aaPredicted RBP17.59■□□□□ 0.41
VCX3A-201ENST00000381089 ME3Q16798 604 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 GLRA4Q5JXX5 417 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 ATF7IP2Q5U623 682 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 ZNF852Q6ZMS4 543 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 NSUN7Q8NE18 718 aaKnown RBP17.59■□□□□ 0.41
VCX3A-201ENST00000381089 ING5Q8WYH8 240 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 KIFAP3Q92845 792 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 TMEM60Q9H2L4 133 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 TOPORSQ9NS56 1045 aaPredicted RBP17.59■□□□□ 0.41
VCX3A-201ENST00000381089 SLC38A7Q9NVC3 462 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 HCFC1R1Q9NWW0 138 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 VWA8A3KMH1 1905 aa17.59■□□□□ 0.41
VCX3A-201ENST00000381089 WNT7AO00755 349 aa17.58■□□□□ 0.4
VCX3A-201ENST00000381089 RHOP08100 348 aa17.58■□□□□ 0.4
VCX3A-201ENST00000381089 OR52Z1P0C646 297 aa17.58■□□□□ 0.4
VCX3A-201ENST00000381089 UPP1Q16831 310 aa17.58■□□□□ 0.4
VCX3A-201ENST00000381089 VARS2Q5ST30 1063 aaKnown RBP17.58■□□□□ 0.4
VCX3A-201ENST00000381089 EEF1DP3Q658K8 133 aa17.58■□□□□ 0.4
VCX3A-201ENST00000381089 TPRG1Q6ZUI0 275 aa17.58■□□□□ 0.4
VCX3A-201ENST00000381089 MAML2Q8IZL2 1156 aaPredicted RBP17.58■□□□□ 0.4
VCX3A-201ENST00000381089 SUMF1Q8NBK3 374 aa17.58■□□□□ 0.4
VCX3A-201ENST00000381089 DDX27Q96GQ7 796 aaKnown RBP17.58■□□□□ 0.4
VCX3A-201ENST00000381089 PPP1R10Q96QC0 940 aaKnown RBP17.58■□□□□ 0.4
VCX3A-201ENST00000381089 CCDC94Q9BW85 323 aaPredicted RBP17.58■□□□□ 0.4
VCX3A-201ENST00000381089 AVENQ9NQS1 362 aaPredicted RBP17.58■□□□□ 0.4
VCX3A-201ENST00000381089 PHLPP2Q6ZVD8 1323 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 K7ERI5 159 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 PRRG1O14668 218 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 PTPN2P17706 415 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 TKTP29401 623 aaKnown RBP17.57■□□□□ 0.4
VCX3A-201ENST00000381089 DCLK2Q8N568 766 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 MCRS1Q96EZ8 462 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 ZSCAN32Q9NX65 697 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 DLL3Q9NYJ7 618 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 USP20Q9Y2K6 914 aa17.57■□□□□ 0.4
VCX3A-201ENST00000381089 MTF2Q9Y483 593 aaPredicted RBP17.57■□□□□ 0.4
VCX3A-201ENST00000381089 MED19A0JLT2 244 aaPredicted RBP17.56■□□□□ 0.4
VCX3A-201ENST00000381089 ZNF197O14709 1029 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 CD72P21854 359 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 RPS9P46781 194 aaKnown RBP17.56■□□□□ 0.4
VCX3A-201ENST00000381089 PPP2R5DQ14738 602 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 ELMOD1Q8N336 334 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 DNASE1L2Q92874 299 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 ELSPBP1Q96BH3 223 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 KIFC3Q9BVG8 833 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 CXCL16Q9H2A7 254 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 TNFSF13BQ9Y275 285 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 STK24Q9Y6E0 443 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 PATJQ8NI35 1801 aa17.56■□□□□ 0.4
VCX3A-201ENST00000381089 CEP250Q9BV73 2442 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 SMIM28A0A1B0GU29 152 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 ARHGEF37A1IGU5 675 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 H7C4K7 107 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 MAN2B1O00754 1011 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 SYN3O14994 580 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 JAK2O60674 1132 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
VCX3A-201ENST00000381089 CCT6AP40227 531 aaKnown RBP17.55■□□□□ 0.4
VCX3A-201ENST00000381089 ROR1Q01973 937 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 ADCY1Q08828 1119 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 GNL2Q13823 731 aaKnown RBP17.55■□□□□ 0.4
VCX3A-201ENST00000381089 RSPO4Q2I0M5 234 aaPredicted RBP17.55■□□□□ 0.4
VCX3A-201ENST00000381089 NT5DC1Q5TFE4 455 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 SLC8B1Q6J4K2 584 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 CLDN23Q96B33 292 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 FAM126AQ9BYI3 521 aaPredicted RBP17.55■□□□□ 0.4
VCX3A-201ENST00000381089 BHMT2Q9H2M3 363 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 NUB1Q9Y5A7 615 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 DNAH14Q0VDD8 3507 aa17.55■□□□□ 0.4
VCX3A-201ENST00000381089 CCDC169A6NNP5 214 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 I3L4J1 428 aa17.54■□□□□ 0.4
VCX3A-201ENST00000381089 PODXLO00592 558 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms