RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PAN2Q504Q3 1202 aaKnown RBP15□□□□□ -0.01
NSMCE1-201ENST00000361439 PPP2R2DQ66LE6 453 aa15□□□□□ -0.01
NSMCE1-201ENST00000361439 COLGALT2Q8IYK4 626 aa15□□□□□ -0.01
NSMCE1-201ENST00000361439 TMC2Q8TDI7 906 aa15□□□□□ -0.01
NSMCE1-201ENST00000361439 CACTINQ8WUQ7 758 aaKnown RBP15□□□□□ -0.01
NSMCE1-201ENST00000361439 FNBP1Q96RU3 617 aa15□□□□□ -0.01
NSMCE1-201ENST00000361439 METTL14Q9HCE5 456 aaKnown RBP15□□□□□ -0.01
NSMCE1-201ENST00000361439 MIOSQ9NXC5 875 aa15□□□□□ -0.01
NSMCE1-201ENST00000361439 PCDHB12Q9Y5F1 795 aa15□□□□□ -0.01
NSMCE1-201ENST00000361439 MRPL42Q9Y6G3 142 aaKnown RBP15□□□□□ -0.01
NSMCE1-201ENST00000361439 LAMA2P24043 3122 aaKnown RBP15□□□□□ -0.01
NSMCE1-201ENST00000361439 LCHNA4D1U4 455 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 IKBKBO14920 756 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 AKAP3O75969 853 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 MYOGP15173 224 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 AFF1P51825 1210 aaKnown RBP14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 TAP1Q03518 808 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 TMEM132DQ14C87 1099 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 ZSCAN23Q3MJ62 389 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 HABP4Q5JVS0 413 aaKnown RBP14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 CEP135Q66GS9 1140 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 CSGALNACT2Q8N6G5 542 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 ZSWIM2Q8NEG5 633 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 BEST2Q8NFU1 509 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 ENOX1Q8TC92 643 aaKnown RBP14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 PARD3BQ8TEW8 1205 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 NOC3LQ8WTT2 800 aaKnown RBP14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 ZMAT2Q96NC0 199 aaKnown RBP14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 ZNF558Q96NG5 402 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 DUSP9Q99956 384 aaKnown RBP14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 NRDE2Q9H7Z3 1164 aa14.99□□□□□ -0.01
NSMCE1-201ENST00000361439 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 ZC3H11AO75152 810 aaKnown RBP eCLIP14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 DDHD2O94830 711 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 GALTP07902 379 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 KRT13P13646 458 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 LRPAP1P30533 357 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 MARSP56192 900 aaKnown RBP14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 DUOXA2Q1HG44 320 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 SPATA1Q5VX52 437 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 JADE1Q6IE81 842 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 KCNT2Q6UVM3 1135 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 FRMD5Q7Z6J6 570 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 ZNF280BQ86YH2 543 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 FAM186BQ8IYM0 893 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 COLGALT1Q8NBJ5 622 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 RDH13Q8NBN7 331 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 BPIFA3Q9BQP9 254 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 FUCA2Q9BTY2 467 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 C11orf84Q9BUA3 381 aaPredicted RBP14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 NKX2-4Q9H2Z4 354 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 PLAGL2Q9UPG8 496 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 CITO14578 2027 aa14.98□□□□□ -0.01
NSMCE1-201ENST00000361439 SYCE3A1L190 88 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 TMEM189-UBE2V1I3L0A0 370 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 STX10O60499 249 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 GTF2H1P32780 548 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 CASP4P49662 377 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 BCAR1P56945 870 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 PLCB3Q01970 1234 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 UBE3AQ05086 875 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 BFSP1Q12934 665 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 UPP1Q16831 310 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 EPC2Q52LR7 807 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 GLRA4Q5JXX5 417 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 DCLRE1AQ6PJP8 1040 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 BORCS6Q96GS4 357 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 ANKRD36BP1Q96IX9 119 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 CGRRF1Q99675 332 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 COLEC11Q9BWP8 271 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 THAP9Q9H5L6 903 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 ZNF576Q9H609 170 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 PDE11AQ9HCR9 933 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 INTS13Q9NVM9 706 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 SPG21Q9NZD8 308 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 ITGA11Q9UKX5 1188 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 LZTS1Q9Y250 596 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 FAN1Q9Y2M0 1017 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 RALGAPA2Q2PPJ7 1873 aa14.97□□□□□ -0.01
NSMCE1-201ENST00000361439 NFICP08651 508 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 TNNI1P19237 187 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 VAMP7P51809 220 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 STX17P56962 302 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 KRT17Q04695 432 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 TPD52L1Q16890 204 aaPredicted RBP14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 FAM114A1Q8IWE2 563 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 IGSF21Q96ID5 467 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 MED15Q96RN5 788 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 SRRTQ9BXP5 876 aaKnown RBP14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 CXCL16Q9H2A7 254 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 DNAJB4Q9UDY4 337 aa14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 ARMCX3Q9UH62 379 aaPredicted RBP14.96□□□□□ -0.01
NSMCE1-201ENST00000361439 H3BNC9 293 aa14.95□□□□□ -0.02
NSMCE1-201ENST00000361439 NRP1O14786 923 aa14.95□□□□□ -0.02
NSMCE1-201ENST00000361439 TRAPPC3O43617 180 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms