RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FAM213AQ9BRX8 229 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 BEGAINQ9BUH8 593 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 MSTO1Q9BUK6 570 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 FZD8Q9H461 694 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 FAM204AQ9H8W3 233 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 CDHR5Q9HBB8 845 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 PRMT7Q9NVM4 692 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 TMEM51Q9NW97 253 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 GCNT4Q9P109 453 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 RNF14Q9UBS8 474 aa14.19□□□□□ -0.14
SQSTM1-201ENST00000360718 PDE2AO00408 941 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 ACKR2O00590 384 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 ABLIM1O14639 778 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 TOM1L1O75674 476 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 SYF2O95926 243 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 PLEKP08567 350 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 GRK4P32298 578 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 PRMT2P55345 433 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 WNT7BP56706 349 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 MYL7Q01449 175 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 C2orf54Q08AI8 447 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 PRPF4BQ13523 1007 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 AMHR2Q16671 573 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 NBPF20Q3BBV1 942 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 SLC9C1Q4G0N8 1177 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CBWD6Q4V339 395 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 SEZ6Q53EL9 994 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CBWD3Q5JTY5 395 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CBWD5Q5RIA9 395 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 DPY19L2P1Q6NXN4 242 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 PDXDC1Q6P996 788 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CDR2LQ86X02 465 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 SH3TC2Q8TF17 1288 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 SYN2Q92777 582 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 FAM84AQ96KN4 292 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 ACO2Q99798 780 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 WBP1LQ9NX94 342 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CEP72Q9P209 647 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 GRIN2DO15399 1336 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 MOCS3O95396 460 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CYP2C9P11712 490 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 ENPEPQ07075 957 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 KIZQ2M2Z5 673 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 LHX8Q68G74 356 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CRELD2Q6UXH1 353 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 SLAIN1Q8ND83 568 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 TMC2Q8TDI7 906 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 DNAJB3Q8WWF6 145 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 BAP1Q92560 729 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 MFSD14AQ96MC6 490 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 NOX5Q96PH1 765 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 OSBPL9Q96SU4 736 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 SELENOOQ9BVL4 669 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 ADAMTS10Q9H324 1103 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 PLCB1Q9NQ66 1216 aa14.18□□□□□ -0.14
SQSTM1-201ENST00000360718 CITO14578 2027 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 A0A0B4J269 797 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 SMIM35A0A1B0GVV1 85 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 C17orf102A2RUQ5 167 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 P4HA2O15460 535 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 FAM189A1O60320 539 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 GPR32O75388 356 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 PON1P27169 355 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 ACOT2P49753 483 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 C1QTNF8P60827 252 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 CYP24A1Q07973 514 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 PPP3CAQ08209 521 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 SPATA4Q8NEY3 305 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 CCDC127Q96BQ5 260 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 CAPN6Q9Y6Q1 641 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 LRRN2O75325 713 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 NOL4O94818 638 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 HARSP12081 509 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 SLC9A1P19634 815 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 FGFR4P22455 802 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 CST5P28325 142 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 POLR2FP61218 127 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 GLE1Q53GS7 698 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 EEF1DP3Q658K8 133 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 ZBTB33Q86T24 672 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 PARD3BQ8TEW8 1205 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 WNT8BQ93098 351 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 POP1Q99575 1024 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 PTPRHQ9HD43 1115 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 ANK1P16157 1881 aa14.17□□□□□ -0.14
SQSTM1-201ENST00000360718 SERPING1P05155 500 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 ACTN1P12814 892 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 PROZP22891 400 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 MCCD1P59942 119 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 FAM187BQ17R55 369 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 ATF7IP2Q5U623 682 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 SFMBT2Q5VUG0 894 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 TSHZ1Q6ZSZ6 1077 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 DNAJC5GQ8N7S2 189 aa14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 PCSK9Q8NBP7 692 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 AENQ8WTP8 325 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-201ENST00000360718 FNBP1Q96RU3 617 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms