RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 A0A087X0B3 334 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 A0A0B4J269 797 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 ABLIM1O14639 778 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 KIF4AO95239 1232 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 GLUD1P00367 558 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 CNPP09543 421 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 KCNC3Q14003 757 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 XKR4Q5GH76 650 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 AXDND1Q5T1B0 1012 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 RESP18Q5W5W9 173 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 ALKAL1Q6UXT8 129 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 POMGNT1Q8WZA1 660 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 FAM212AQ96EL1 285 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 KIF12Q96FN5 646 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 FBXL18Q96ME1 805 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 NECTIN4Q96NY8 510 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 CHST7Q9NS84 486 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 KBTBD4Q9NVX7 518 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 FNIP2Q9P278 1114 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
TSPAN4-201ENST00000346501 CXCL8P10145 99 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 MTHFRP42898 656 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 CLCNKBP51801 687 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 UPP1Q16831 310 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 SLC10A6Q3KNW5 377 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 SEZ6Q53EL9 994 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 ATAT1Q5SQI0 421 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 L1TD1Q5T7N2 865 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 KIAA0319Q5VV43 1072 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 TAS1R1Q7RTX1 841 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 RNF168Q8IYW5 571 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 VN1R2Q8NFZ6 395 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 STAMQ92783 540 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 FIZ1Q96SL8 496 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 PAAF1Q9BRP4 392 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 TRIM9Q9C026 710 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 SFXN1Q9H9B4 322 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 AGO2Q9UKV8 859 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 UBQLN1Q9UMX0 589 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-201ENST00000346501 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 F8W810 466 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 TULP1O00294 542 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 PODXLO00592 558 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 TEX28O15482 410 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 LILRB3O75022 631 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 LDHAP00338 332 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 C1RP00736 705 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 CLCN4P51793 760 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 CBX2Q14781 532 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 NAB2Q15742 525 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 E2F4Q16254 413 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 BEST2Q8NFU1 509 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 SLC22A17Q8WUG5 538 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 LEO1Q8WVC0 666 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 PIK3R5Q8WYR1 880 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 APOL5Q9BWW9 433 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 PHF7Q9BWX1 381 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 ADAM7Q9H2U9 754 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 TTC28Q96AY4 2481 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 CITO14578 2027 aa17.16■□□□□ 0.34
TSPAN4-201ENST00000346501 NCOR1O75376 2440 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 FRMD3A2A2Y4 597 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 EPCAMP16422 314 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 CYP3A5P20815 502 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 CMA1P23946 247 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 POU5F1Q01860 360 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 ZP2Q05996 745 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 PSMD5Q16401 504 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 RARS2Q5T160 578 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 SYCE2Q6PIF2 218 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 ANKS3Q6ZW76 656 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 HDAC7Q8WUI4 952 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 CCDC47Q96A33 483 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 C7orf25Q9BPX7 421 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 CXCL16Q9H2A7 254 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 PLEKHA4Q9H4M7 779 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 GOLGA2P5Q9HBQ8 144 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 NR2E1Q9Y466 385 aa17.15■□□□□ 0.34
TSPAN4-201ENST00000346501 EYSQ5T1H1 3165 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 TTC26A0AVF1 554 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 ARHGEF37A1IGU5 675 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 ANKRD63C9JTQ0 380 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 KIAA0391O15091 583 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 EFEMP2O95967 443 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 SLFN14P0C7P3 912 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 ALADP13716 330 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 PAX3P23760 479 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 MCM4P33991 863 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 TNFSF9P41273 254 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 AFMP43652 599 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 FAM26FQ5R3K3 315 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 CNNM4Q6P4Q7 775 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms