RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 ACAD10Q6JQN1 1059 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 FAM160B2Q86V87 743 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 ARHGEF19Q8IW93 802 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 CPXCR1Q8N123 301 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 CKAP2Q8WWK9 683 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 DCPSQ96C86 337 aaKnown RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 RBM15Q96T37 977 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 RIT2Q99578 217 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 HSD17B14Q9BPX1 270 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 CBWD1Q9BRT8 395 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 VAV3Q9UKW4 847 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 COG5Q9UP83 839 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 SMG5Q9UPR3 1016 aaKnown RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 SCINQ9Y6U3 715 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 RPTORQ8N122 1335 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 PLS3P13797 630 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 PTGIRP43119 386 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 MXRA7P84157 204 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 POU5F1Q01860 360 aaKnown RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 DCAF12L1Q5VU92 463 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 CENPUQ71F23 418 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 PALB2Q86YC2 1186 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 AGAP11Q8TF27 550 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 ATG4AQ8WYN0 398 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 CCDC134Q9H6E4 229 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 ADAM22Q9P0K1 906 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 SPAG7O75391 227 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 LMNAP02545 664 aaKnown RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 HOXD13P35453 343 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 NCALDP61601 193 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 KCNJ2P63252 427 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 SPIRE1Q08AE8 756 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 PPP2R5CQ13362 524 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 SNRNP35Q16560 246 aaKnown RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 BRDTQ58F21 947 aaPredicted RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 GMCL1P1Q8NEA9 526 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 FAM167BQ9BTA0 163 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 TUBB6Q9BUF5 446 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 IKZF4Q9H2S9 585 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 TRABDQ9H4I3 376 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 LRRC19Q9H756 370 aa10.03□□□□□ -0.8
TRERF1-201ENST00000340840 H0YCG3 227 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.8
TRERF1-201ENST00000340840 CYP11B1P15538 503 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 RBM41Q96IZ5 413 aaKnown RBP10.02□□□□□ -0.8
TRERF1-201ENST00000340840 NUDCD1Q96RS6 583 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 TIPINQ9BVW5 301 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 UNC45AQ9H3U1 944 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 KCNG1Q9UIX4 513 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 SLC12A4Q9UP95 1085 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 PCDHB4Q9Y5E5 795 aa10.02□□□□□ -0.8
TRERF1-201ENST00000340840 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.02□□□□□ -0.8
TRERF1-201ENST00000340840 KRT1P04264 644 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 PIK3CAP42336 1068 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 MAGEA4P43358 317 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 LIG4P49917 911 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 RAD23BP54727 409 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 TTC27Q6P3X3 843 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 SLC30A10Q6XR72 485 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 NOP9Q86U38 636 aaKnown RBP10.02□□□□□ -0.81
TRERF1-201ENST00000340840 SLC47A2Q86VL8 602 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 PALM2Q8IXS6 379 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 KIRREL3Q8IZU9 778 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 C11orf70Q9BRQ4 267 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 OSBPL8Q9BZF1 889 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 TMEM8AQ9HCN3 771 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 ZBTB39O15060 712 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 TJP3O95049 919 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 IRX1P78414 480 aaPredicted RBP10.02□□□□□ -0.81
TRERF1-201ENST00000340840 NLRX1Q86UT6 975 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 SLC5A5Q92911 643 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 SYNCQ9H7C4 482 aa10.02□□□□□ -0.81
TRERF1-201ENST00000340840 COL14A1Q05707 1796 aaKnown RBP10.01□□□□□ -0.81
TRERF1-201ENST00000340840 SGK1O00141 431 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 EDIL3O43854 480 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 ALAS1P13196 640 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 SESN3P58005 492 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 PPP3CAQ08209 521 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 DLGAP5Q15398 846 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 ANKRD27Q96NW4 1050 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 CPSF2Q9P2I0 782 aaKnown RBP10.01□□□□□ -0.81
TRERF1-201ENST00000340840 STOML1Q9UBI4 398 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 ZFP69BQ9UJL9 534 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 NAALADL1Q9UQQ1 740 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 RREB1Q92766 1687 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 DENND3A2RUS2 1198 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 H0Y3Z8 333 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 PSMD10O75832 226 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 DNAJC3Q13217 504 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 ZNF268Q14587 947 aaPredicted RBP10.01□□□□□ -0.81
TRERF1-201ENST00000340840 CIAPIN1Q6FI81 312 aa10.01□□□□□ -0.81
TRERF1-201ENST00000340840 TRIM72Q6ZMU5 477 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms