RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 SLC10A6Q3KNW5 377 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ARMCX5Q6P1M9 558 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 TMEM173Q86WV6 379 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 KLHL23Q8NBE8 558 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 BCL7CQ8WUZ0 217 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 ZNF775Q96BV0 537 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 SNX27Q96L92 541 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 GUCD1Q96NT3 240 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 FAM213AQ9BRX8 229 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 MRPL9Q9BYD2 267 aaKnown RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 CLSTN2Q9H4D0 955 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 TMEM206Q9H813 350 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 GOLGA2P5Q9HBQ8 144 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 ALG13Q9NP73 1137 aaKnown RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 UBN1Q9NPG3 1134 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
CDC42-201ENST00000315554 MAN1B1Q9UKM7 699 aa8.57□□□□□ -1.04
CDC42-201ENST00000315554 CHD9Q3L8U1 2897 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 UBE4BO95155 1302 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 SMIM28A0A1B0GU29 152 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 LACTBL1A8MY62 500 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 GRM6O15303 877 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 ITGB1P05556 798 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 CLTAP09496 248 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 LAG3P18627 525 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 IGFBP4P22692 258 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 IGFBP6P24592 240 aaPredicted RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 MCM4P33991 863 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 OR1G1P47890 313 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 GUCY2FP51841 1108 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 WNT7BP56706 349 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 BCAR1P56945 870 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 SOX4Q06945 474 aaPredicted RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 ADGRE1Q14246 886 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 KNOP1Q1ED39 458 aaKnown RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 BMT2Q1RMZ1 405 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 SLFN12LQ6IEE8 588 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 KCNT2Q6UVM3 1135 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 CRELD2Q6UXH1 353 aaPredicted RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 MICALL1Q8N3F8 863 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 RDH13Q8NBN7 331 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 HASPINQ8TF76 798 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 C18orf25Q96B23 403 aaPredicted RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 ZMAT2Q96NC0 199 aaKnown RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 ZNF558Q96NG5 402 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 CDX2Q99626 313 aaPredicted RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 PAAF1Q9BRP4 392 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 ADAM33Q9BZ11 813 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 RPF1Q9H9Y2 349 aaKnown RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 AGPAT3Q9NRZ7 376 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 RMND1Q9NWS8 449 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 MTMR10Q9NXD2 777 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 HSPBP1Q9NZL4 362 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 CPSF3Q9UKF6 684 aaKnown RBP8.56□□□□□ -1.04
CDC42-201ENST00000315554 PCDHB12Q9Y5F1 795 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 PCDHGC5Q9Y5F6 944 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 STYXL1Q9Y6J8 313 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 KIAA1671Q9BY89 1806 aa8.56□□□□□ -1.04
CDC42-201ENST00000315554 TMEM265A0A087WTH1 108 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 PPP1R3GB7ZBB8 358 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 INPPL1O15357 1258 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 LPXNO60711 386 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 FGF18O76093 207 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 THP07101 528 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 GALTP07902 379 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 BMP6P22004 513 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 GARTP22102 1010 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 DNAJB1P25685 340 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 PRCPP42785 496 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 PPP2R3AQ06190 1150 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 GRIK3Q13003 919 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 NAB2Q15742 525 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 ZNF658Q5TYW1 1059 aaPredicted RBP8.55□□□□□ -1.04
CDC42-201ENST00000315554 LMBRD2Q68DH5 695 aaPredicted RBP8.55□□□□□ -1.04
CDC42-201ENST00000315554 KLHL10Q6JEL2 608 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 HS2ST1Q7LGA3 356 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 CBWD2Q8IUF1 395 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 COLGALT2Q8IYK4 626 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 SPATA20Q8TB22 786 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 GSDMAQ96QA5 445 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 PPP1R10Q96QC0 940 aaKnown RBP8.55□□□□□ -1.04
CDC42-201ENST00000315554 GZF1Q9H116 711 aaPredicted RBP8.55□□□□□ -1.04
CDC42-201ENST00000315554 NUP62CLQ9H1M0 184 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 KCTD10Q9H3F6 313 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 TOPORSQ9NS56 1045 aaPredicted RBP8.55□□□□□ -1.04
CDC42-201ENST00000315554 KANSL3Q9P2N6 904 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 TUBGCP4Q9UGJ1 667 aa8.55□□□□□ -1.04
CDC42-201ENST00000315554 COL4A4P53420 1690 aaPredicted RBP8.55□□□□□ -1.04
CDC42-201ENST00000315554 TTC26A0AVF1 554 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 TRIM49BA6NDI0 452 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 H3BNC9 293 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 NRP1O14786 923 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 EXTL3O43909 919 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 ADRB2P07550 413 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 NFICP08651 508 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 CA8P35219 290 aa8.54□□□□□ -1.04
CDC42-201ENST00000315554 ALDH7A1P49419 539 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms