RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TMEM88BA6NKF7 163 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 ZEB2O60315 1214 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 FTCDO95954 541 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 CST3P01034 146 aaPredicted RBP23.98■■□□□ 1.43
SMAD1-201ENST00000302085 SURF1Q15526 300 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 TMEM192Q8IY95 271 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 SMC1BQ8NDV3 1235 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 COG1Q8WTW3 980 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 GPBP1L1Q9HC44 474 aaPredicted RBP23.98■■□□□ 1.43
SMAD1-201ENST00000302085 Q9Y3F1 56 aa23.98■■□□□ 1.43
SMAD1-201ENST00000302085 FAM170AA1A519 330 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 FMO1Q01740 532 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 NCOA4Q13772 614 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 MEI1Q5TIA1 1274 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 TPCN2Q8NHX9 752 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 CPB2Q96IY4 423 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 HHIPL1Q96JK4 782 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 OSBPL9Q96SU4 736 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 ISCUQ9H1K1 167 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 PDZD7Q9H5P4 517 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 NUB1Q9Y5A7 615 aa23.97■■□□□ 1.43
SMAD1-201ENST00000302085 PDE2AO00408 941 aaPredicted RBP23.96■■□□□ 1.43
SMAD1-201ENST00000302085 MMEP08473 750 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 KRT5P13647 590 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 ARF4P18085 180 aaPredicted RBP23.96■■□□□ 1.43
SMAD1-201ENST00000302085 BEX3Q00994 111 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 HIC1Q14526 733 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 MFSD10Q14728 455 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 DUOXA2Q1HG44 320 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 CREG2Q8IUH2 290 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 LRRC57Q8N9N7 239 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 DDX1Q92499 740 aaKnown RBP23.96■■□□□ 1.43
SMAD1-201ENST00000302085 ARHGAP39Q9C0H5 1083 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 MTMR12Q9C0I1 747 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 AP5M1Q9H0R1 490 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 HYOU1Q9Y4L1 999 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 NCANO14594 1321 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 NRCAMQ92823 1304 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 CALCAP01258 141 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 FTLP02792 175 aaPredicted RBP23.96■■□□□ 1.43
SMAD1-201ENST00000302085 MCF2P10911 925 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 ZSCAN20P17040 1043 aaPredicted RBP23.96■■□□□ 1.43
SMAD1-201ENST00000302085 ACO1P21399 889 aaKnown RBP23.96■■□□□ 1.43
SMAD1-201ENST00000302085 ABCB4P21439 1286 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 IFI16Q16666 785 aaKnown RBP23.96■■□□□ 1.43
SMAD1-201ENST00000302085 TRPV1Q8NER1 839 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 THAP2Q9H0W7 228 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 ADAMTS10Q9H324 1103 aa23.96■■□□□ 1.43
SMAD1-201ENST00000302085 UMODL1Q5DID0 1318 aa23.95■■□□□ 1.43
SMAD1-201ENST00000302085 ANKRD62A6NC57 917 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 HAS3O00219 553 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 CLTAP09496 248 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 PSEN2P49810 448 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 CDR2Q01850 454 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 CUL2Q13617 745 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 CYP4F22Q6NT55 531 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 ZNF410Q86VK4 478 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 EFCAB13Q8IY85 973 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 PDCL2Q8N4E4 241 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 GPR161Q8N6U8 529 aaKnown RBP23.95■■□□□ 1.42
SMAD1-201ENST00000302085 ARHGEF26Q96DR7 871 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 SCLT1Q96NL6 688 aa23.95■■□□□ 1.42
SMAD1-201ENST00000302085 MBLAC1A4D2B0 266 aaPredicted RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 MEFVO15553 781 aaPredicted RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 B4GALT4O60513 344 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 MYL3P08590 195 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 TCP1P17987 556 aaKnown RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 CPT1AP50416 773 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 NOP14P78316 857 aaKnown RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 FBXO38Q6PIJ6 1188 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 PAXIP1Q6ZW49 1069 aaPredicted RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 SLC35G2Q8TBE7 412 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 CTNNBL1Q8WYA6 563 aaPredicted RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 PSMB7Q99436 277 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 FAM49AQ9H0Q0 323 aaPredicted RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 RPF1Q9H9Y2 349 aaKnown RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 TSKSQ9UJT2 592 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 TSPAN1O60635 241 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 RTN2O75298 545 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 STAG3L1P0CL83 205 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 CXCL8P10145 99 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 GZMAP12544 262 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 H2AFXP16104 143 aaPredicted RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 CXCR5P32302 372 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 PSMC4P43686 418 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 PDE6CP51160 858 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 TFAMQ00059 246 aaKnown RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 CKAP4Q07065 602 aaKnown RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 KIZQ2M2Z5 673 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 NOA1Q8NC60 698 aaKnown RBP23.94■■□□□ 1.42
SMAD1-201ENST00000302085 OSGEPQ9NPF4 335 aa23.94■■□□□ 1.42
SMAD1-201ENST00000302085 ASS1P00966 412 aaKnown RBP23.93■■□□□ 1.42
SMAD1-201ENST00000302085 MYL6P60660 151 aa23.93■■□□□ 1.42
SMAD1-201ENST00000302085 ADAM17P78536 824 aa23.93■■□□□ 1.42
SMAD1-201ENST00000302085 RUFY4Q6ZNE9 571 aa23.93■■□□□ 1.42
SMAD1-201ENST00000302085 SLFN11Q7Z7L1 901 aa23.93■■□□□ 1.42
SMAD1-201ENST00000302085 RFFLQ8WZ73 363 aa23.93■■□□□ 1.42
SMAD1-201ENST00000302085 GOLPH3Q9H4A6 298 aa23.93■■□□□ 1.42
SMAD1-201ENST00000302085 CDHR5Q9HBB8 845 aa23.93■■□□□ 1.42
SMAD1-201ENST00000302085 GABRQQ9UN88 632 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms