RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 CNTNAP4Q9C0A0 1308 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 EIF4E1BA6NMX2 242 aaKnown RBP21.96■■□□□ 1.11
LTBP3-201ENST00000301873 PHF2O75151 1096 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 TSPY1Q01534 308 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 C2CD6Q53TS8 623 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 HSP90AA5PQ58FG0 334 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 RNF135Q8IUD6 432 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 ALKBH8Q96BT7 664 aaKnown RBP21.96■■□□□ 1.11
LTBP3-201ENST00000301873 RMDN2Q96LZ7 410 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 CYP4F11Q9HBI6 524 aa21.96■■□□□ 1.11
LTBP3-201ENST00000301873 NVLO15381 856 aaKnown RBP21.95■■□□□ 1.1
LTBP3-201ENST00000301873 PDGFRBP09619 1106 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 EMC2Q15006 297 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 SLC30A10Q6XR72 485 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 RFX8Q6ZV50 586 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 FAF1Q9UNN5 650 aaPredicted RBP21.95■■□□□ 1.1
LTBP3-201ENST00000301873 DAGLBQ8NCG7 672 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 DMGDHQ9UI17 866 aaKnown RBP21.95■■□□□ 1.1
LTBP3-201ENST00000301873 CAMSAP1Q5T5Y3 1602 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 TRIM66O15016 1216 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 TMEM62Q0P6H9 643 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 PIN4Q9Y237 131 aaKnown RBP21.95■■□□□ 1.1
LTBP3-201ENST00000301873 INO80Q9ULG1 1556 aaPredicted RBP21.95■■□□□ 1.1
LTBP3-201ENST00000301873 DIP2CQ9Y2E4 1556 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 SPATA31A5Q5VU36 1347 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 SPATA31A7Q8IWB4 1347 aa21.95■■□□□ 1.1
LTBP3-201ENST00000301873 KCNN4O15554 427 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 DYNC1LI2O43237 492 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 YWHAHQ04917 246 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 KIF19Q2TAC6 998 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 SEZ6Q53EL9 994 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 PARD3BQ8TEW8 1205 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 PRMT1Q99873 361 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 SENP7Q9BQF6 1050 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ERP44Q9BS26 406 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 TRIM4Q9C037 500 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 DONSONQ9NYP3 566 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ANGPTL2Q9UKU9 493 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 CCDC78A2IDD5 438 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 IRAK1P51617 712 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 TRMT10CQ7L0Y3 403 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 KDELC2Q7Z4H8 507 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 SEMA6BQ9H3T3 888 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 LCMT1Q9UIC8 334 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 MEFVO15553 781 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 KRT10P13645 584 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 CHN1P15882 459 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 PAMP19021 973 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 PAPOLAP51003 745 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 CACNB2Q08289 660 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ANKRD20A4Q4UJ75 823 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ANKRD20A8PQ5CZ79 823 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ANKRD20A2Q5SQ80 823 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ANKRD20A1Q5TYW2 823 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 C1orf146Q5VVC0 180 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 TRIM65Q6PJ69 517 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 TTC39CQ8N584 583 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 RBM46Q8TBY0 533 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.94■■□□□ 1.12e-8■■■■■ 45.4
LTBP3-201ENST00000301873 MOV10L1Q9BXT6 1211 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 THAP2Q9H0W7 228 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 GGA3Q9NZ52 723 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ZFATQ9P243 1243 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 ASB14A6NK59 587 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 CHEK2O96017 543 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 EEF1B2P24534 225 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 HSPA9P38646 679 aaKnown RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 SGSM1Q2NKQ1 1148 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 FAM161BQ96MY7 647 aa21.94■■□□□ 1.1
LTBP3-201ENST00000301873 KLF6Q99612 283 aaPredicted RBP21.94■■□□□ 1.1
LTBP3-201ENST00000301873 KPNA7A9QM74 516 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 ZNF710Q8N1W2 664 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 CCDC124Q96CT7 223 aaKnown RBP21.93■■□□□ 1.1
LTBP3-201ENST00000301873 UPF3AQ9H1J1 476 aaKnown RBP21.93■■□□□ 1.1
LTBP3-201ENST00000301873 NEU2Q9Y3R4 380 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 KIAA0391O15091 583 aaKnown RBP21.93■■□□□ 1.1
LTBP3-201ENST00000301873 ATP5HO75947 161 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 ITIH2P19823 946 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 CDR2Q01850 454 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 MXD4Q14582 209 aaPredicted RBP21.93■■□□□ 1.1
LTBP3-201ENST00000301873 SMTNL2Q2TAL5 461 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 ICE2Q659A1 982 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 CENPPQ6IPU0 288 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 BARGINQ6ZT62 677 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 CCDC138Q96M89 665 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 TMEM8AQ9HCN3 771 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 FAM49BQ9NUQ9 324 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 RBP3P10745 1247 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 TAC1P20366 129 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 TAP1Q03518 808 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 C3orf67Q6ZVT6 689 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.93■■□□□ 1.1
LTBP3-201ENST00000301873 PPME1Q9Y570 386 aa21.93■■□□□ 1.1
LTBP3-201ENST00000301873 EIF3DO15371 548 aaKnown RBP eCLIP21.92■■□□□ 1.1
LTBP3-201ENST00000301873 SLC29A2Q14542 456 aa21.92■■□□□ 1.1
LTBP3-201ENST00000301873 ARHGEF6Q15052 776 aa21.92■■□□□ 1.1
LTBP3-201ENST00000301873 RPAINQ86UA6 219 aa21.92■■□□□ 1.1
LTBP3-201ENST00000301873 DNAAF5Q86Y56 855 aa21.92■■□□□ 1.1
LTBP3-201ENST00000301873 CDKL3Q8IVW4 592 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms