RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 SNX27Q96L92 541 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 PPP1R10Q96QC0 940 aaKnown RBP13.16□□□□□ -0.3
HMGB2-201ENST00000296503 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 GTPBP4Q9BZE4 634 aaKnown RBP13.16□□□□□ -0.3
HMGB2-201ENST00000296503 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 TMEM206Q9H813 350 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 RPF1Q9H9Y2 349 aaKnown RBP13.16□□□□□ -0.3
HMGB2-201ENST00000296503 SLC38A7Q9NVC3 462 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 MARCH5Q9NX47 278 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
HMGB2-201ENST00000296503 FAM237AA0A1B0GTK4 181 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 PVALEFA0A1B0GWK0 134 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 CXCL8P10145 99 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 CTSAP10619 480 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 TNFSF9P41273 254 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 ADAM15Q13444 863 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 NAB2Q15742 525 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 XKR4Q5GH76 650 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 FAM26FQ5R3K3 315 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 CAVIN1Q6NZI2 390 aaKnown RBP13.16□□□□□ -0.3
HMGB2-201ENST00000296503 TAS1R1Q7RTX1 841 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 VN1R3Q9BXE9 311 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 ZBP1Q9H171 429 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 ADAM28Q9UKQ2 775 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 TRIP11Q15643 1979 aa13.16□□□□□ -0.3
HMGB2-201ENST00000296503 EYSQ5T1H1 3165 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
HMGB2-201ENST00000296503 C2orf71A6NGG8 1288 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 C2CD2LO14523 706 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 LINC01565O15544 149 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 ZNF202O95125 648 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 SOD2P04179 222 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 KCNE1P15382 129 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 ACOT2P49753 483 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 NDUFV1P49821 464 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 PPP2R3AQ06190 1150 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 SPAG1Q07617 926 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 DMTNQ08495 405 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 FUT10Q6P4F1 479 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 EFHBQ8N7U6 833 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 UROC1Q96N76 676 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 ZMAT2Q96NC0 199 aaKnown RBP13.15□□□□□ -0.3
HMGB2-201ENST00000296503 ASB2Q96Q27 587 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 CDCA3Q99618 268 aaPredicted RBP13.15□□□□□ -0.3
HMGB2-201ENST00000296503 PLEKHA5Q9HAU0 1116 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 GOLGA2P5Q9HBQ8 144 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
HMGB2-201ENST00000296503 CNTN3Q9P232 1028 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 STYXL1Q9Y6J8 313 aa13.15□□□□□ -0.3
HMGB2-201ENST00000296503 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 LACTBL1A8MY62 500 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 H3BQ06 376 aaPredicted RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 CLCNKBP51801 687 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 DUSP6Q16828 381 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 KRBA2Q6ZNG9 492 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 GLIS3Q8NEA6 775 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 NOC3LQ8WTT2 800 aaKnown RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 CCDC34Q96HJ3 373 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 GPR62Q9BZJ7 368 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 SSX2IPQ9Y2D8 614 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 TTC26A0AVF1 554 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 MEFVO15553 781 aaPredicted RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 B3GAT3O94766 335 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 KIF20AO95235 890 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 URODP06132 367 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 ADSSP30520 456 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 ENOX2Q16206 610 aaKnown RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 CTC1Q2NKJ3 1217 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 TJAP1Q5JTD0 557 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 C18orf25Q96B23 403 aaPredicted RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 EMILIN2Q9BXX0 1053 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 EXOC1Q9NV70 894 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
HMGB2-201ENST00000296503 IRAK3Q9Y616 596 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 CITO14578 2027 aa13.14□□□□□ -0.31
HMGB2-201ENST00000296503 EIF3DO15371 548 aaKnown RBP eCLIP13.13□□□□□ -0.312e-24■□□□□ 10
HMGB2-201ENST00000296503 KIF4AO95239 1232 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 LDHAP00338 332 aaKnown RBP13.13□□□□□ -0.31
HMGB2-201ENST00000296503 MYL1P05976 194 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 KLRC2P26717 231 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 LTBRP36941 435 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 GLUD2P49448 558 aa13.13□□□□□ -0.31
HMGB2-201ENST00000296503 KCNQ1P51787 676 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms