RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CA3P07451 260 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 EPB41P11171 864 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 SPATA1Q5VX52 437 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 INTS8Q75QN2 995 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 NT5DC4Q86YG4 428 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 PLEKHO2Q8TD55 490 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 PARD3BQ8TEW8 1205 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 CLP1Q92989 425 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 NAT10Q9H0A0 1025 aaKnown RBP18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 NRDE2Q9H7Z3 1164 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 SLC38A7Q9NVC3 462 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 CHD9Q3L8U1 2897 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 ARHGEF15O94989 841 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 FGFR1OPO95684 399 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 NFICP08651 508 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 TUSC3Q13454 348 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 TMEM132DQ14C87 1099 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 EFCAB13Q8IY85 973 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 COLGALT2Q8IYK4 626 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 TMC2Q8TDI7 906 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 CCDC127Q96BQ5 260 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 FAM193BQ96PV7 902 aaPredicted RBP18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 BPIFA3Q9BQP9 254 aa18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 UBQLN1Q9UMX0 589 aaKnown RBP18.02■□□□□ 0.48
CHCHD3-201ENST00000262570 DLATP10515 647 aaKnown RBP18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 CYP3A5P20815 502 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 DNAJB2P25686 324 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 CLDN10P78369 228 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 SOX4Q06945 474 aaPredicted RBP18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 ENPEPQ07075 957 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 TPD52L1Q16890 204 aaPredicted RBP18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 IRF2BP1Q8IU81 584 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 C18orf25Q96B23 403 aaPredicted RBP18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 POP1Q99575 1024 aaKnown RBP18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 DNAJB4Q9UDY4 337 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 NFE2L3Q9Y4A8 694 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 TRIP11Q15643 1979 aa18.01■□□□□ 0.47
CHCHD3-201ENST00000262570 TULP1O00294 542 aaPredicted RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 XPOTO43592 962 aaKnown RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 ZC3H11AO75152 810 aaKnown RBP eCLIP18■□□□□ 0.47
CHCHD3-201ENST00000262570 GNA14O95837 355 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 ZNF165P49910 485 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 VAMP7P51809 220 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 MARSP56192 900 aaKnown RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 DLG4P78352 724 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 BFSP1Q12934 665 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 LRSAM1Q6UWE0 723 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 FRMD5Q7Z6J6 570 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 USP37Q86T82 979 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 WDR49Q8IV35 697 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 CGRRF1Q99675 332 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 NKX2-4Q9H2Z4 354 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 THAP9Q9H5L6 903 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 GOLGA2P5Q9HBQ8 144 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 METTL14Q9HCE5 456 aaKnown RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 INTS13Q9NVM9 706 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 ARMCX3Q9UH62 379 aaPredicted RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 GTF3C5Q9Y5Q8 519 aaPredicted RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 PTPRJQ12913 1337 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 LRRIQ3A6PVS8 624 aaPredicted RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 IKBKBO14920 756 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 CAVIN2O95810 425 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 ALDH2P05091 517 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 GALTP07902 379 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 KRT13P13646 458 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 LAG3P18627 525 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 TNNI1P19237 187 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 BCAR1P56945 870 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 ZNF445P59923 1031 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 TFAMQ00059 246 aaKnown RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 MYL5Q02045 173 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 TAP1Q03518 808 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 NCAPHQ15003 741 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 C1orf220Q5T0J3 134 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 SPOUT1Q5T280 376 aaKnown RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 LMBRD2Q68DH5 695 aaPredicted RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 BEST2Q8NFU1 509 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 OR5B17Q8NGF7 314 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 CACTINQ8WUQ7 758 aaKnown RBP18■□□□□ 0.47
CHCHD3-201ENST00000262570 TMEM175Q9BSA9 504 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 SLC28A3Q9HAS3 691 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 TUBGCP4Q9UGJ1 667 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 RALGAPA2Q2PPJ7 1873 aa18■□□□□ 0.47
CHCHD3-201ENST00000262570 CASTOR2A6NHX0 329 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 LRPAP1P30533 357 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 SLC11A1P49279 550 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 ALDH7A1P49419 539 aaKnown RBP17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 DUOXA2Q1HG44 320 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 CCDC40Q4G0X9 1142 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 KCNT2Q6UVM3 1135 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 ZNF516Q92618 1163 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 TIFAQ96CG3 184 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 FAM84AQ96KN4 292 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 PAAF1Q9BRP4 392 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 AAASQ9NRG9 546 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 SAMSN1Q9NSI8 373 aaKnown RBP17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 RWDD3Q9Y3V2 267 aa17.99■□□□□ 0.47
CHCHD3-201ENST00000262570 ANK1P16157 1881 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms