RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PRG3Q9Y2Y8 225 aaPredicted RBP20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 SZT2Q5T011 3432 aa20.37■□□□□ 0.85
CYSTM1-201ENST00000261811 LACTBL1A8MY62 500 aa20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 GRM6O15303 877 aa20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 TGFB1I1O43294 461 aa20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 TADA2AO75478 443 aa20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 RPL9P32969 192 aaKnown RBP20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 DDX53Q86TM3 631 aaKnown RBP20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 BEST2Q8NFU1 509 aa20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 CACTINQ8WUQ7 758 aaKnown RBP20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 NGRNQ9NPE2 291 aaKnown RBP20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 RBAKQ9NYW8 714 aaPredicted RBP20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 SSX2IPQ9Y2D8 614 aa20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 MTCH2Q9Y6C9 303 aa20.36■□□□□ 0.85
CYSTM1-201ENST00000261811 CASTOR2A6NHX0 329 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 CLIC2O15247 247 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 TRAPPC3O43617 180 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 MBD3O95983 291 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 ADRB2P07550 413 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 CYP3A5P20815 502 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 RPL13P26373 211 aaKnown RBP20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 CYP2J2P51589 502 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 ELAVL2Q12926 359 aaKnown RBP20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 ADGRE1Q14246 886 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 MYBPC2Q14324 1141 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 TMEM132DQ14C87 1099 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 CAMK4Q16566 473 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 COBLL1Q53SF7 1204 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 ZBTB41Q5SVQ8 909 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 DCLRE1AQ6PJP8 1040 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 TMC7Q7Z402 723 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 MICALL1Q8N3F8 863 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 TRIML1Q8N9V2 468 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 TSG101Q99816 390 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 NUP62CLQ9H1M0 184 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 ENTPD7Q9NQZ7 604 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 ADAM28Q9UKQ2 775 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 MAPK8IP1Q9UQF2 711 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 C2CD2Q9Y426 696 aa20.35■□□□□ 0.85
CYSTM1-201ENST00000261811 GOLGA8IPA6NC78 632 aa20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 GOLGA8JA6NMD2 632 aa20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 EXOC3O60645 756 aa20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 NAB2Q15742 525 aa20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 BRSK2Q8IWQ3 736 aa20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 ERCC4Q92889 916 aaPredicted RBP20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 ZMAT2Q96NC0 199 aaKnown RBP20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 CLSTN2Q9H4D0 955 aa20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 NSUN3Q9H649 340 aaKnown RBP20.34■□□□□ 0.85
CYSTM1-201ENST00000261811 SF3B1O75533 1304 aaKnown RBP eCLIP20.33■□□□□ 0.854e-6■■■■■ 95.6
CYSTM1-201ENST00000261811 FSD2A1L4K1 749 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 PSMA7O14818 248 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 B4GALT3O60512 393 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 PTMSP20962 102 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 CA8P35219 290 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 SNRNP35Q16560 246 aaKnown RBP20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 JADE1Q6IE81 842 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 CRELD2Q6UXH1 353 aaPredicted RBP20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 SLC9A9Q8IVB4 645 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 VPS52Q8N1B4 723 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 TMEM174Q8WUU8 243 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 TCF25Q9BQ70 676 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 KCTD10Q9H3F6 313 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 KIAA1468Q9P260 1216 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 MAN1B1Q9UKM7 699 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 TRAF3IP3Q9Y228 551 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 FRMD4BQ9Y2L6 1034 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 R3HCC1Q9Y3T6 440 aaKnown RBP20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 MYO7AQ13402 2215 aa20.33■□□□□ 0.85
CYSTM1-201ENST00000261811 TMEM189-UBE2V1I3L0A0 370 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 B3GAT3O94766 335 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 PAX3P23760 479 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 CLCNKBP51801 687 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 UPP1Q16831 310 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 KIAA1841Q6NSI8 718 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 USP37Q86T82 979 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 MAFAQ8NHW3 353 aaPredicted RBP20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 FNBP1Q96RU3 617 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 CXCL16Q9H2A7 254 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 NUB1Q9Y5A7 615 aa20.32■□□□□ 0.84
CYSTM1-201ENST00000261811 PODXLO00592 558 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 NCK2O43639 380 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 NR3C1P04150 777 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 PRCPP42785 496 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 SPAG1Q07617 926 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 ZBTB6Q15916 424 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 NFIL3Q16649 462 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 ISM2Q6H9L7 571 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 FUT10Q6P4F1 479 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 RDH13Q8NBN7 331 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 C18orf25Q96B23 403 aaPredicted RBP20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 DHTKD1Q96HY7 919 aaPredicted RBP20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 FBXL18Q96ME1 805 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 MARCH5Q9NX47 278 aa20.31■□□□□ 0.84
CYSTM1-201ENST00000261811 CSPG5O95196 566 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 CXCL14O95715 111 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 SOD2P04179 222 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 URODP06132 367 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 TMEM191BP0C7N4 346 aa20.3■□□□□ 0.84
CYSTM1-201ENST00000261811 CTSAP10619 480 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms