RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 RBBP8NLQ8NC74 664 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 SH3RF3Q8TEJ3 882 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 LLPHQ9BRT6 129 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 WACQ9BTA9 647 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 SIAEQ9HAT2 523 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PPANQ9NQ55 473 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 DDX19AQ9NUU7 478 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PAQR5Q9NXK6 330 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 GIN1Q9NXP7 522 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ABCC1P33527 1531 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PNMA6EA0A0J9YXQ4 647 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 A8MUI8 341 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 KPNA5O15131 536 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 RAD51BO15315 384 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ATMINO43313 823 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 DNAJB5O75953 348 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ECDO95905 644 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ALDH18A1P54886 795 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 CBLBQ13191 982 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 LEXMQ3ZCV2 418 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 KCNT1Q5JUK3 1230 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 MAP3K21Q5TCX8 1036 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 C8orf74Q6P047 294 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ERAP2Q6P179 960 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PEX26Q7Z412 305 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ANKRD44Q8N8A2 993 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 TTC17Q96AE7 1141 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 EME1Q96AY2 570 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 GAL3ST1Q99999 423 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 WNT8AQ9H1J5 351 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 VPS37BQ9H9H4 285 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 TAS2R7Q9NYW3 318 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 SLC7A8Q9UHI5 535 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ERVK-11Q9UQG0 969 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 TRPM2O94759 1503 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 C1orf232A0A0U1RR37 186 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 H7C1D1 291 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 RANBP6O60518 1105 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PLEKHA8P1O95397 391 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 GUCA1CO95843 209 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 IFNA14P01570 189 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ATP5BP06576 529 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ZNF33BQ06732 778 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 NPTX1Q15818 432 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 VPS72Q15906 364 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 QPCTQ16769 361 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ZC2HC1CQ53FD0 456 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 SNAP47Q5SQN1 464 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 DENND2CQ68D51 928 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 MARK2Q7KZI7 788 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 USP37Q86T82 979 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ELMOD2Q8IZ81 293 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ANKS4BQ8N8V4 417 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PPHLN1Q8NEY8 458 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 FANK1Q8TC84 345 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 JPH3Q8WXH2 748 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 MRPS27Q92552 414 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ZNF274Q96GC6 653 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 RNPEPL1Q9HAU8 725 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 SLC38A10Q9HBR0 1119 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 SAMD15Q9P1V8 674 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 RABGEF1Q9UJ41 708 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 TBC1D30Q9Y2I9 924 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 IFT52Q9Y366 437 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 RICTORQ6R327 1708 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 CAPN14A8MX76 684 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 TRIM77I1YAP6 450 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 MAPK13O15264 365 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 ITGB3P05106 788 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 KRT7P08729 469 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 TMEM11P17152 192 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 NR1D1P20393 614 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 TNFAIP3P21580 790 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 MSH2P43246 934 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 CDK7P50613 346 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 CLCN4P51793 760 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 OTUD4Q01804 1114 aaKnown RBP8.19□□□□□ -1.1
GPNMB-201ENST00000258733 RHAGQ02094 409 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 NNTQ13423 1086 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 TXNRD1Q16881 649 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 GRAMD1BQ3KR37 738 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 FUT11Q495W5 492 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 RBM20Q5T481 1227 aaKnown RBP8.19□□□□□ -1.1
GPNMB-201ENST00000258733 SWSAP1Q6NVH7 229 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 KSR2Q6VAB6 950 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 CACNA2D4Q7Z3S7 1137 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 REXO1Q8N1G1 1221 aaKnown RBP8.19□□□□□ -1.1
GPNMB-201ENST00000258733 SH2D3CQ8N5H7 860 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 TTLL11Q8NHH1 800 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 SLC9A6Q92581 669 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 C9orf16Q9BUW7 83 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 ARNT2Q9HBZ2 717 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 LUZP4Q9P127 313 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 VPS51Q9UID3 782 aa8.19□□□□□ -1.1
GPNMB-201ENST00000258733 SYCP2Q9BX26 1530 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms