RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 NAP1L3Q99457 506 aaPredicted RBP18.93■□□□□ 0.62
GCDH-201ENST00000222214 GOLPH3Q9H4A6 298 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 SLC5A4Q9NY91 659 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 SMARCAL1Q9NZC9 954 aa18.93■□□□□ 0.62
GCDH-201ENST00000222214 PTPRJQ12913 1337 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 CYP1A2P05177 515 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 WNT7BP56706 349 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 GABPB1Q06547 395 aaPredicted RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 SMC1AQ14683 1233 aaKnown RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 LMBRD2Q68DH5 695 aaPredicted RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 TRIM72Q6ZMU5 477 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 IFT20Q8IY31 132 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 KATNBL1Q9H079 304 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 PRMT7Q9NVM4 692 aaPredicted RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 CPSF3Q9UKF6 684 aaKnown RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 COG5Q9UP83 839 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 ZNF236Q9UL36 1845 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 ZSWIM8A7E2V4 1837 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 A0A0U1RQG5 324 aaPredicted RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 ABLIM1O14639 778 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 CLTAP09496 248 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 MYBL1P10243 752 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 HARSP12081 509 aaKnown RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 TMOD1P28289 359 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 PHKA2P46019 1235 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 POU5F1Q01860 360 aaKnown RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 IRF5Q13568 498 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 NCOA4Q13772 614 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 FAM187BQ17R55 369 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 CLEC16AQ2KHT3 1053 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 ATF7IP2Q5U623 682 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 PLEKHH3Q7Z736 793 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 IFNLR1Q8IU57 520 aaPredicted RBP18.92■□□□□ 0.62
GCDH-201ENST00000222214 NLRP4Q96MN2 994 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 ABHD16BQ9H3Z7 469 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 RNPEPQ9H4A4 650 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 PTPRHQ9HD43 1115 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 CNTN6Q9UQ52 1028 aa18.92■□□□□ 0.62
GCDH-201ENST00000222214 INO80B-WBP1J3KQ70 363 aa18.91■□□□□ 0.62
GCDH-201ENST00000222214 CELF2O95319 508 aaKnown RBP18.91■□□□□ 0.62
GCDH-201ENST00000222214 INSRRP14616 1297 aa18.91■□□□□ 0.62
GCDH-201ENST00000222214 NOP14P78316 857 aaKnown RBP18.91■□□□□ 0.62
GCDH-201ENST00000222214 PPP2R5EQ16537 467 aa18.91■□□□□ 0.62
GCDH-201ENST00000222214 DUOXA2Q1HG44 320 aa18.91■□□□□ 0.62
GCDH-201ENST00000222214 UBL4BQ8N7F7 174 aa18.91■□□□□ 0.62
GCDH-201ENST00000222214 MAML3Q96JK9 1138 aa18.91■□□□□ 0.62
GCDH-201ENST00000222214 INO80BQ9C086 356 aaPredicted RBP18.91■□□□□ 0.62
GCDH-201ENST00000222214 DMGDHQ9UI17 866 aaKnown RBP18.91■□□□□ 0.62
GCDH-201ENST00000222214 TNFSF13BQ9Y275 285 aa18.91■□□□□ 0.62
GCDH-201ENST00000222214 NOC2LQ9Y3T9 749 aaKnown RBP18.91■□□□□ 0.62
GCDH-201ENST00000222214 DDX3YO15523 660 aaKnown RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 SNAI1O95863 264 aaPredicted RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 FAM193AP78312 1265 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 MBTD1Q05BQ5 628 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 MKRN3Q13064 507 aaKnown RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 TMEM63BQ5T3F8 832 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 ZBTB33Q86T24 672 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 TRAPPC12Q8WVT3 735 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 ALG6Q9Y672 507 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 SLC15A5A6NIM6 579 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 HOXD8P13378 290 aaPredicted RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 ACO1P21399 889 aaKnown RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 CLCN3P51790 818 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 EPHB4P54760 987 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 ZNF568Q3ZCX4 644 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 DUSP28Q4G0W2 176 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 IQSEC1Q6DN90 963 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 EMBQ6PCB8 327 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 LINC01465Q8N7H1 131 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 EIF1ADQ8N9N8 165 aaKnown RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 OR5B17Q8NGF7 314 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 AENQ8WTP8 325 aaKnown RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 AFG1LQ8WV93 481 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.9■□□□□ 0.62
GCDH-201ENST00000222214 ZNF653Q96CK0 615 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 ACP6Q9NPH0 428 aa18.9■□□□□ 0.62
GCDH-201ENST00000222214 AVENQ9NQS1 362 aaPredicted RBP18.9■□□□□ 0.62
GCDH-201ENST00000222214 TTLL13PA6NNM8 815 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 B4GALT4O60513 344 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 IL18RAPO95256 599 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
GCDH-201ENST00000222214 UNGP13051 313 aaPredicted RBP18.89■□□□□ 0.61
GCDH-201ENST00000222214 TNFSF9P41273 254 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 ADCYAP1R1P41586 468 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 KYAT1Q16773 422 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 TMEM132AQ24JP5 1023 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 SGSM1Q2NKQ1 1148 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 ZNF564Q8TBZ8 553 aaPredicted RBP18.89■□□□□ 0.61
GCDH-201ENST00000222214 HDAC7Q8WUI4 952 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 KRT12Q99456 494 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 TINF2Q9BSI4 451 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 WNT8AQ9H1J5 351 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 SLITRK6Q9H5Y7 841 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 APOBEC3GQ9HC16 384 aaKnown RBP18.89■□□□□ 0.61
GCDH-201ENST00000222214 GDF3Q9NR23 364 aa18.89■□□□□ 0.61
GCDH-201ENST00000222214 ZMYND10O75800 440 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 CLSTN1O94985 981 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 TNNT3P45378 269 aaPredicted RBP18.88■□□□□ 0.61
GCDH-201ENST00000222214 TNFAIP2Q03169 654 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 C16orf70Q9BSU1 422 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms