RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ADGRB3O60242 1522 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 PSMD3O43242 534 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 GRID2IPA4D2P6 1211 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 FAM187AA6NFU0 413 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 ARHGEF7Q14155 803 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 KDELC2Q7Z4H8 507 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 ATPAF2Q8N5M1 289 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 NT5C1AQ9BXI3 368 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 PMS2P54278 862 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 ARHGAP15Q53QZ3 475 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 CCDC137Q6PK04 289 aaKnown RBP19.99■□□□□ 0.79
SMPD3-201ENST00000219334 NRBF2Q96F24 287 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 XAB2Q9HCS7 855 aaKnown RBP19.99■□□□□ 0.79
SMPD3-201ENST00000219334 TEKT2Q9UIF3 430 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 GLI2P10070 1586 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 KCNA2P16389 499 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 ALDH7A1P49419 539 aaKnown RBP19.99■□□□□ 0.79
SMPD3-201ENST00000219334 PLA2G4FQ68DD2 849 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 LRRC71Q8N4P6 559 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 ASPSCR1Q9BZE9 553 aa19.99■□□□□ 0.79
SMPD3-201ENST00000219334 C17orf102A2RUQ5 167 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 PYGLP06737 847 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 AKT1P31749 480 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 EXOSC10Q01780 885 aaKnown RBP19.98■□□□□ 0.79
SMPD3-201ENST00000219334 RBBP7Q16576 425 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 SLITRK1Q96PX8 696 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 MRPL40Q9NQ50 206 aaKnown RBP19.98■□□□□ 0.79
SMPD3-201ENST00000219334 APEX2Q9UBZ4 518 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 CD163L1Q9NR16 1453 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 GPR75-ASB3A0A0A6YYF3 556 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 MMEP08473 750 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 SKIP12755 728 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 WASHC5Q12768 1159 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 DCDC2CA8MYV0 355 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 IRF1P10914 325 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 ACADSBP45954 432 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 OSBPL9Q96SU4 736 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 DDX47Q9H0S4 455 aaKnown RBP19.98■□□□□ 0.79
SMPD3-201ENST00000219334 ZFATQ9P243 1243 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 CLCA2Q9UQC9 943 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 C9orf131Q5VYM1 1079 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 PABPC5Q96DU9 382 aaKnown RBP19.98■□□□□ 0.79
SMPD3-201ENST00000219334 TMEM169Q96HH4 297 aa19.98■□□□□ 0.79
SMPD3-201ENST00000219334 VCPP55072 806 aaKnown RBP19.97■□□□□ 0.79
SMPD3-201ENST00000219334 CCDC15Q0P6D6 951 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 IZUMO3Q5VZ72 239 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 RBBP8NLQ8NC74 664 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-201ENST00000219334 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.97■□□□□ 0.79
SMPD3-201ENST00000219334 SLC30A1Q9Y6M5 507 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 STOX1Q6ZVD7 989 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 C1orf54Q8WWF1 131 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 KDM4CQ9H3R0 1056 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 ADARB2Q9NS39 739 aaKnown RBP19.97■□□□□ 0.79
SMPD3-201ENST00000219334 LAMB3Q13751 1172 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 SCFD1Q8WVM8 642 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 ELAC2Q9BQ52 826 aaKnown RBP19.97■□□□□ 0.79
SMPD3-201ENST00000219334 POLR3CQ9BUI4 534 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-201ENST00000219334 FBXO2Q9UK22 296 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-201ENST00000219334 ARSEP51690 589 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 RCOR2Q8IZ40 523 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 IGDCC4Q8TDY8 1250 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 STK33Q9BYT3 514 aa19.97■□□□□ 0.79
SMPD3-201ENST00000219334 LRG1P02750 347 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 DEUP1Q05D60 604 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 FAM47EQ6ZV65 393 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 JMJD4Q9H9V9 463 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 MAP2K2P36507 400 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 SMAD1Q15797 465 aaKnown RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 GRAMD1BQ3KR37 738 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 NFRKBQ6P4R8 1299 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 MTHFD1LQ6UB35 978 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 GPRASP2Q96D09 838 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 COLEC11Q9BWP8 271 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 KCNN4O15554 427 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 NCK2O43639 380 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 SYF2O95926 243 aaKnown RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 KITP10721 976 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 SESN2P58004 480 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 ERO1BQ86YB8 467 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 NUDCD3Q8IVD9 361 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 RDM1Q8NG50 284 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 MTBPQ96DY7 904 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 THOC1Q96FV9 657 aaKnown RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 INTUQ9ULD6 942 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 PRG3Q9Y2Y8 225 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 TEX33O43247 280 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 HARS2P49590 506 aaKnown RBP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 EFTUD2Q15029 972 aaKnown RBP eCLIP19.96■□□□□ 0.79
SMPD3-201ENST00000219334 RRM2BQ7LG56 351 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 PLEKHH3Q7Z736 793 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 DDIASQ8IXT1 998 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 HIPK4Q8NE63 616 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 SENP7Q9BQF6 1050 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 SLC13A1Q9BZW2 595 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 TMEM60Q9H2L4 133 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 ANKEF1Q9NU02 776 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 IGSF9BQ9UPX0 1349 aa19.96■□□□□ 0.79
SMPD3-201ENST00000219334 DIAPH2O60879 1101 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms