RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 PHYKPLQ8IUZ5 450 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 DZIP1LQ8IYY4 767 aaKnown RBP5.5□□□□□ -1.53
CDRT1-208ENST00000630868 NRG4Q8WWG1 115 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 ERCC4Q92889 916 aaPredicted RBP5.5□□□□□ -1.53
CDRT1-208ENST00000630868 KAT5Q92993 513 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 PHKBQ93100 1093 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 UBE2FQ969M7 185 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 JMJD8Q96S16 334 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 BRIP1Q9BX63 1249 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 ACE2Q9BYF1 805 aaPredicted RBP5.5□□□□□ -1.53
CDRT1-208ENST00000630868 ATP6V0A4Q9HBG4 840 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 AGO4Q9HCK5 861 aaKnown RBP5.5□□□□□ -1.53
CDRT1-208ENST00000630868 RIC8BQ9NVN3 520 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 PGAP2Q9UHJ9 254 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 KCNG1Q9UIX4 513 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 STXBP5LQ9Y2K9 1186 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 NR2E3Q9Y5X4 410 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 SCN4AP35499 1836 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 ADAMTSL1Q8N6G6 1762 aa5.5□□□□□ -1.53
CDRT1-208ENST00000630868 COL11A2P13942 1736 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 SLX4Q8IY92 1834 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 UBA6A0AVT1 1052 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 RNF225M0QZC1 329 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 M0R3H8 397 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 DDNO94850 711 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 RHOBTB3O94955 611 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 APOL3O95236 402 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 HSPA8P11142 646 aaKnown RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 TSHRP16473 764 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 GJA4P35212 333 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 MAP2K6P52564 334 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 BCAR1P56945 870 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 SNX17Q15036 470 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 PUM3Q15397 648 aaKnown RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 PAN2Q504Q3 1202 aaKnown RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 EMC4Q5J8M3 183 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 MROH9Q5TGP6 573 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 IZUMO3Q5VZ72 239 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 BTBD8Q5XKL5 378 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 ZNF385CQ66K41 422 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 DAAM2Q86T65 1068 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 DPP9Q86TI2 863 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 CILP2Q8IUL8 1156 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 PPHLN1Q8NEY8 458 aaKnown RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 KLHDC4Q8TBB5 520 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 ZSCAN18Q8TBC5 510 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 ASB15Q8WXK1 588 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 IRF7Q92985 503 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 ISCA1Q9BUE6 129 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 BTBD1Q9H0C5 482 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 TAOK3Q9H2K8 898 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 TAF1DQ9H5J8 278 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 DCP1AQ9NPI6 582 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 SEMA3GQ9NS98 782 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 PCDHGB2Q9Y5G2 931 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 UBR2Q8IWV8 1755 aa5.49□□□□□ -1.53
CDRT1-208ENST00000630868 TNRC18O15417 2968 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-208ENST00000630868 ARFGEF2Q9Y6D5 1785 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 SCN7AQ01118 1682 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 KRIT1O00522 736 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 RNMTO43148 476 aaKnown RBP5.48□□□□□ -1.53
CDRT1-208ENST00000630868 PRPF6O94906 941 aaKnown RBP5.48□□□□□ -1.53
CDRT1-208ENST00000630868 PRLP01236 227 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 ESR1P03372 595 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 PFKMP08237 780 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 MYF5P13349 255 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 IL13P35225 146 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 MAPK9P45984 424 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 RAB1AP62820 205 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 DSC2Q02487 901 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 EGR3Q06889 387 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 ZNF543Q08ER8 600 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 MALLQ13021 153 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 SLC39A6Q13433 755 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 IL10RAQ13651 578 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 MBTPS1Q14703 1052 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 HLA-DQA1Q5Y7H0 255 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 STEAP3Q658P3 488 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 SULT6B1Q6IMI4 303 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 PRR5LQ6MZQ0 368 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 THAP5Q7Z6K1 395 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 LIX1LQ8IVB5 337 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 OXR1Q8N573 874 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 SKA1Q96BD8 255 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 GCC1Q96CN9 775 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 SCARF2Q96GP6 870 aaPredicted RBP5.48□□□□□ -1.53
CDRT1-208ENST00000630868 G6PC3Q9BUM1 346 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 IRX2Q9BZI1 471 aaPredicted RBP5.48□□□□□ -1.53
CDRT1-208ENST00000630868 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 MYLK2Q9H1R3 596 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 ZMAT3Q9HA38 289 aaKnown RBP5.48□□□□□ -1.53
CDRT1-208ENST00000630868 RRN3Q9NYV6 651 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.48□□□□□ -1.53
CDRT1-208ENST00000630868 THSD7BQ9C0I4 1608 aa5.48□□□□□ -1.53
CDRT1-208ENST00000630868 PRSS47A8MTI9 375 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms