RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 CCDC94Q9BW85 323 aaPredicted RBP19.84■□□□□ 0.77
LIG1-216ENST00000598938 GTPBP4Q9BZE4 634 aaKnown RBP19.84■□□□□ 0.77
LIG1-216ENST00000598938 PARP2Q9UGN5 583 aa19.84■□□□□ 0.77
LIG1-216ENST00000598938 MAN1B1Q9UKM7 699 aa19.84■□□□□ 0.77
LIG1-216ENST00000598938 MTUS1Q9ULD2 1270 aa19.84■□□□□ 0.77
LIG1-216ENST00000598938 KCNA5P22460 613 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 MLH1P40692 756 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 AFF1P51825 1210 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 SNRPFP62306 86 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 PTPROQ16827 1216 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 COBLL1Q53SF7 1204 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 ZNF658Q5TYW1 1059 aaPredicted RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 LRRC55Q6ZSA7 311 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 GUF1Q8N442 669 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 POMGNT1Q8WZA1 660 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 CLP1Q92989 425 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 MRPL38Q96DV4 380 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 ZFP42Q96MM3 310 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 GAD1Q99259 594 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 MRPL9Q9BYD2 267 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 KCNH6Q9H252 994 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 KIAA1468Q9P260 1216 aa19.83■□□□□ 0.77
LIG1-216ENST00000598938 AGO2Q9UKV8 859 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 MRPL42Q9Y6G3 142 aaKnown RBP19.83■□□□□ 0.77
LIG1-216ENST00000598938 KIF20AO95235 890 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 CLTAP09496 248 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 OSTNP61366 133 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 KYAT1Q16773 422 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 SEZ6Q53EL9 994 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 TIGD5Q53EQ6 642 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 PTCRAQ6ISU1 281 aaPredicted RBP19.82■□□□□ 0.76
LIG1-216ENST00000598938 LRRC43Q8N309 656 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 GSTCDQ8NEC7 633 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 URGCPQ8TCY9 931 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 ACAP3Q96P50 834 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 CBWD1Q9BRT8 395 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 NUP62CLQ9H1M0 184 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 KCTD10Q9H3F6 313 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 CWH43Q9H720 699 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 AGPAT3Q9NRZ7 376 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 TYW1Q9NV66 732 aaKnown RBP19.82■□□□□ 0.76
LIG1-216ENST00000598938 TBC1D13Q9NVG8 400 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 KLK14Q9P0G3 267 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 CGNQ9P2M7 1197 aaKnown RBP19.82■□□□□ 0.76
LIG1-216ENST00000598938 INPP5FQ9Y2H2 1132 aa19.82■□□□□ 0.76
LIG1-216ENST00000598938 GRXCR2A6NFK2 248 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 MEFVO15553 781 aaPredicted RBP19.81■□□□□ 0.76
LIG1-216ENST00000598938 TNFSF9P41273 254 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 SCNN1GP51170 649 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 YARSP54577 528 aaKnown RBP19.81■□□□□ 0.76
LIG1-216ENST00000598938 MORC3Q14149 939 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 XKR4Q5GH76 650 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 ZBTB41Q5SVQ8 909 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 ARMCX5Q6P1M9 558 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 ALKAL1Q6UXT8 129 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 C12orf56Q8IXR9 622 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 SMYD4Q8IYR2 804 aaPredicted RBP19.81■□□□□ 0.76
LIG1-216ENST00000598938 SNX27Q96L92 541 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 CXCL16Q9H2A7 254 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 TOPORSQ9NS56 1045 aaPredicted RBP19.81■□□□□ 0.76
LIG1-216ENST00000598938 MIOSQ9NXC5 875 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 KANSL3Q9P2N6 904 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 HCSTQ9UBK5 93 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 CPSF3Q9UKF6 684 aaKnown RBP19.81■□□□□ 0.76
LIG1-216ENST00000598938 FAM50BQ9Y247 325 aa19.81■□□□□ 0.76
LIG1-216ENST00000598938 PDXKO00764 312 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 PTGESO14684 152 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 KIAA0391O15091 583 aaKnown RBP19.8■□□□□ 0.76
LIG1-216ENST00000598938 IL9P15248 144 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 BMP6P22004 513 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 SSTR3P32745 418 aaPredicted RBP19.8■□□□□ 0.76
LIG1-216ENST00000598938 HS2ST1Q7LGA3 356 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 GOLGA5Q8TBA6 731 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 C17orf80Q9BSJ5 609 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 PRKAG3Q9UGI9 489 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 MAPK8IP1Q9UQF2 711 aa19.8■□□□□ 0.76
LIG1-216ENST00000598938 LDHAP00338 332 aaKnown RBP19.79■□□□□ 0.76
LIG1-216ENST00000598938 POMCP01189 267 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 ADRB2P07550 413 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 PRCPP42785 496 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 POU5F1Q01860 360 aaKnown RBP19.79■□□□□ 0.76
LIG1-216ENST00000598938 COL19A1Q14993 1142 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 ENOX2Q16206 610 aaKnown RBP19.79■□□□□ 0.76
LIG1-216ENST00000598938 SLC10A6Q3KNW5 377 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 ISM2Q6H9L7 571 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 CRELD2Q6UXH1 353 aaPredicted RBP19.79■□□□□ 0.76
LIG1-216ENST00000598938 TRIML1Q8N9V2 468 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 ZSWIM2Q8NEG5 633 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 TMEM174Q8WUU8 243 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 SAAL1Q96ER3 474 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 RPS6KC1Q96S38 1066 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 PCIF1Q9H4Z3 704 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 CNTN3Q9P232 1028 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 PLAGL2Q9UPG8 496 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 RWDD3Q9Y3V2 267 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 KIAA1671Q9BY89 1806 aa19.79■□□□□ 0.76
LIG1-216ENST00000598938 TTC26A0AVF1 554 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 BIN1O00499 593 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 EXTL3O43909 919 aa19.78■□□□□ 0.76
LIG1-216ENST00000598938 B4GALT3O60512 393 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms