RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 RAD50Q92878 1312 aa8.71□□□□□ -1.02
VMP1-213ENST00000591877 KIAA1217Q5T5P2 1943 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 FAM95CA0A1B0GW59 222 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 C9IYK1 514 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 SGSM2O43147 1006 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 ASGR1P07306 291 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 C6orf222P0C671 652 aaPredicted RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 ADMP35318 185 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 CDK7P50613 346 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 ALDH5A1P51649 535 aaPredicted RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 BEX3Q00994 111 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 TNFAIP2Q03169 654 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 CCDC178Q5BJE1 867 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 AXDND1Q5T1B0 1012 aaPredicted RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 STOX1Q6ZVD7 989 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 ANKRD33Q7Z3H0 272 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 SKAP1Q86WV1 359 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 THNSL2Q86YJ6 484 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 FBXO16Q8IX29 292 aaPredicted RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 ADGRF4Q8IZF3 695 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 ZNF513Q8N8E2 541 aaPredicted RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 AGBL5Q8NDL9 886 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 BAHD1Q8TBE0 780 aaPredicted RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 CHAC2Q8WUX2 184 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 EXOC2Q96KP1 924 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 KRT23Q9C075 422 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 IRF2BPLQ9H1B7 796 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 KAT14Q9H8E8 782 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 PRDM5Q9NQX1 630 aaPredicted RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 STARD7Q9NQZ5 370 aa8.7□□□□□ -1.02
VMP1-213ENST00000591877 INTS7Q9NVH2 962 aaKnown RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 BAZ2BQ9UIF8 2168 aaKnown RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 LAMA2P24043 3122 aaKnown RBP8.7□□□□□ -1.02
VMP1-213ENST00000591877 TRBV23-1A0A0A0MS06 115 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 PTPDC1A2A3K4 754 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 KIAA0355O15063 1070 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 PQBP1O60828 265 aaKnown RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 CAPNS1P04632 268 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 CLTBP09497 229 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 EDNRBP24530 442 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 CALML3P27482 149 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 EPHB4P54760 987 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 RPS6P62753 249 aaKnown RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 SUMO1P63165 101 aaKnown RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 SHHQ15465 462 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 CDC37Q16543 378 aaPredicted RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 SLC35G1Q2M3R5 365 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 PLEKHG6Q3KR16 790 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 USH1GQ495M9 461 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 C9orf50Q5SZB4 431 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 TDRD10Q5VZ19 366 aaKnown RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 RNF207Q6ZRF8 634 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 Q7L0L9 218 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 ZNF227Q86WZ6 799 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 SMYD4Q8IYR2 804 aaPredicted RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 PCSK9Q8NBP7 692 aaKnown RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 FBLIM1Q8WUP2 373 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 MAP4K1Q92918 833 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 TOX2Q96NM4 488 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 DPH2Q9BQC3 489 aaPredicted RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 LBHD1Q9BQE6 289 aaPredicted RBP8.69□□□□□ -1.02
VMP1-213ENST00000591877 CAAP1Q9H8G2 361 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 VTA1Q9NP79 307 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 WHRNQ9P202 907 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 KLHL42Q9P2K6 505 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 PCOLCE2Q9UKZ9 415 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 GRIN2DO15399 1336 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 ELP1O95163 1332 aa8.69□□□□□ -1.02
VMP1-213ENST00000591877 E7EWF7 191 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 DYNC1LI2O43237 492 aaPredicted RBP8.68□□□□□ -1.02
VMP1-213ENST00000591877 PPP1R11O60927 126 aaPredicted RBP8.68□□□□□ -1.02
VMP1-213ENST00000591877 PPM1BO75688 479 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 TP53P04637 393 aaPredicted RBP8.68□□□□□ -1.02
VMP1-213ENST00000591877 SOX5P35711 763 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 ASPAP45381 313 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 ANTXR2P58335 489 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 PPP2R2AP63151 447 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 QRICH1Q2TAL8 776 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 ASPRV1Q53RT3 343 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
VMP1-213ENST00000591877 FOXB2Q5VYV0 432 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 IQSEC1Q6DN90 963 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 PAOXQ6QHF9 649 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 CXCL17Q6UXB2 119 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 ARMCX6Q7L4S7 300 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 DYMQ7RTS9 669 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 TLK2Q86UE8 772 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 C2CD4AQ8NCU7 369 aaPredicted RBP8.68□□□□□ -1.02
VMP1-213ENST00000591877 PPP1R13LQ8WUF5 828 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 NUP133Q8WUM0 1156 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 RUFY2Q8WXA3 655 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 RCC1LQ96I51 464 aaKnown RBP8.68□□□□□ -1.02
VMP1-213ENST00000591877 GLT1D1Q96MS3 346 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 TBC1D32Q96NH3 1257 aa8.68□□□□□ -1.02
VMP1-213ENST00000591877 UBAC1Q9BSL1 405 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms