RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 HLA-DRAP01903 254 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 FTLP02792 175 aaPredicted RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 LGALS2P05162 132 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 RHOXF2BP0C7M4 288 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 PROZP22891 400 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 MARK3P27448 753 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 USP8P40818 1118 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 YWHAEP62258 255 aaKnown RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 TNNC1P63316 161 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 FAM193AP78312 1265 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 BIRC3Q13489 604 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 DUOXA2Q1HG44 320 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 SGSM1Q2NKQ1 1148 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 ACAD10Q6JQN1 1059 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 C11orf63Q6NUN7 778 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 NFRKBQ6P4R8 1299 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 MPZL3Q6UWV2 235 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 APBB1IPQ7Z5R6 666 aaPredicted RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 NOA1Q8NC60 698 aaKnown RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 OLIG1Q8TAK6 271 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 COG1Q8WTW3 980 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS25-206ENST00000591584 POP1Q99575 1024 aaKnown RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 RHOXF2Q9BQY4 288 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 R3HDMLQ9H3Y0 253 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 FAM124BQ9H5Z6 455 aaPredicted RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 ABCB6Q9NP58 842 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 PDGFCQ9NRA1 345 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 SEPT11Q9NVA2 429 aaKnown RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 UVRAGQ9P2Y5 699 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 LCMT1Q9UIC8 334 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 NOCTQ9UK39 431 aaKnown RBP11.17□□□□□ -0.62
VPS25-206ENST00000591584 CNTN6Q9UQ52 1028 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 TNFSF13BQ9Y275 285 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 STXBP5LQ9Y2K9 1186 aa11.17□□□□□ -0.62
VPS25-206ENST00000591584 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
VPS25-206ENST00000591584 ZNF185O15231 689 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 CYP26A1O43174 497 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 ZEB2O60315 1214 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 B4GALT4O60513 344 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 SGPL1O95470 568 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 C22orf31O95567 290 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 SNAI1O95863 264 aaPredicted RBP11.16□□□□□ -0.62
VPS25-206ENST00000591584 FTCDO95954 541 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 INSRRP14616 1297 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 TNFRSF8P28908 595 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 PIK3CAP42336 1068 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 ACOT2P49753 483 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 CUL2Q13617 745 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 DGKDQ16760 1214 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 LONRF2Q1L5Z9 754 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 BEND6Q5SZJ8 279 aaPredicted RBP11.16□□□□□ -0.62
VPS25-206ENST00000591584 ATF7IP2Q5U623 682 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 NT5DC3Q86UY8 548 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 RASGEF1CQ8N431 466 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 EIF1ADQ8N9N8 165 aaKnown RBP11.16□□□□□ -0.62
VPS25-206ENST00000591584 ZNF516Q92618 1163 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 TATDN2Q93075 761 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 HES6Q96HZ4 224 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 VCPIP1Q96JH7 1222 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 MAML3Q96JK9 1138 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 KATNBL1Q9H079 304 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 VIPAS39Q9H9C1 493 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 PDE11AQ9HCR9 933 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
VPS25-206ENST00000591584 GTF3C4Q9UKN8 822 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 L1RE1Q9UN81 338 aa11.16□□□□□ -0.62
VPS25-206ENST00000591584 WDR81Q562E7 1941 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 TMCO5BA8MYB1 307 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 H3BRB1 525 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 KCNK3O14649 394 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 MAP2K7O14733 419 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 CYP1A2P05177 515 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
VPS25-206ENST00000591584 MCF2P10911 925 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 HSPA6P17066 643 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 CHRNB2P17787 502 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 FMO1Q01740 532 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
VPS25-206ENST00000591584 CCNI2Q6ZMN8 369 aaPredicted RBP11.15□□□□□ -0.62
VPS25-206ENST00000591584 NOP9Q86U38 636 aaKnown RBP11.15□□□□□ -0.62
VPS25-206ENST00000591584 ZNF410Q86VK4 478 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 NT5DC4Q86YG4 428 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 CD302Q8IX05 232 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 METTL13Q8N6R0 699 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 UBL4BQ8N7F7 174 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 LINC01465Q8N7H1 131 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
VPS25-206ENST00000591584 COPS5Q92905 334 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms