RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GPR101Q96P66 508 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 ALOXE3Q9BYJ1 711 aa5.07□□□□□ -1.6
SMCHD1-206ENST00000581631 WIPF3A6NGB9 483 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 KDM1AO60341 852 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 ALOX15P16050 662 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 NEK4P51957 841 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 BMS1Q14692 1282 aaKnown RBP5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 C9orf106Q8NAJ2 232 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 REPS2Q8NFH8 660 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 ZNF384Q8TF68 577 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 BOD1Q96IK1 185 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 ZSWIM1Q9BR11 485 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 KCTD10Q9H3F6 313 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 CD2APQ9Y5K6 639 aa5.06□□□□□ -1.6
SMCHD1-206ENST00000581631 PROB1E7EW31 1015 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 LPLP06858 475 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 SNRPA1P09661 255 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 GCSHP23434 173 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 CANXP27824 592 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 LGALS4P56470 323 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 CXADRP78310 365 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 MXRA7P84157 204 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 SF3A1Q15459 793 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 ARHGEF25Q86VW2 580 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 FUBP3Q96I24 572 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 PAWRQ96IZ0 340 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 KLK15Q9H2R5 256 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 RNF7Q9UBF6 113 aa5.05□□□□□ -1.6
SMCHD1-206ENST00000581631 RPTORQ8N122 1335 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 A0A1B0GTW7 788 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 OCRLQ01968 901 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 PDCD1Q15116 288 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 TSHZ3Q63HK5 1081 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 Q6ZVL8 140 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 NINJ1Q92982 152 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 DNAJC2Q99543 621 aaKnown RBP5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 KIAA1586Q9HCI6 787 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 EMC7Q9NPA0 242 aa5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 ARPP21Q9UBL0 812 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-206ENST00000581631 FKBP9O95302 570 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 FGFR4P22455 802 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 TCEA2Q15560 299 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 CYP2A13Q16696 494 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 C21orf62-AS1Q17RA5 79 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 TKFCQ3LXA3 575 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 BROXQ5VW32 411 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 MED25Q71SY5 747 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 FKBP9P1Q75LS8 142 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 DRC7Q8IY82 874 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 LNX2Q8N448 690 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 OR7D4Q8NG98 312 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 SMG7Q92540 1137 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 KMT5AQ9NQR1 393 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 SCOCQ9UIL1 159 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 KCNE5Q9UJ90 142 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 SIK3Q9Y2K2 1263 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 NOX1Q9Y5S8 564 aa5.03□□□□□ -1.6
SMCHD1-206ENST00000581631 PHF2O75151 1096 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 PRSS23O95084 383 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 ZFPL1O95159 310 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 SP140Q13342 867 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 SPDYE7PQ495Y7 208 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 CT83Q5H943 113 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 RASSF3Q86WH2 238 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 FAM43AQ8N2R8 423 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 Q8N9P0 234 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 ACTRT2Q8TDY3 377 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 SREK1Q8WXA9 508 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 HOXB13Q92826 284 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 RNF31Q96EP0 1072 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 PHACTR3Q96KR7 559 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 TARS2Q9BW92 718 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 RNPEPQ9H4A4 650 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 UNKLQ9H9P5 680 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 BCO1Q9HAY6 547 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 GALNT9Q9HCQ5 603 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 SLC17A6Q9P2U8 582 aa5.02□□□□□ -1.61
SMCHD1-206ENST00000581631 GUCY1A2P33402 732 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 PTPN7P35236 360 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 MRPS35P82673 323 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 KIAA0895LQ68EN5 471 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 CNNM4Q6P4Q7 775 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 ZNF788Q6ZQV5 615 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 NPM2Q86SE8 214 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 PPM1KQ8N3J5 372 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 SLC5A5Q92911 643 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 MRFAP1L1Q96HT8 127 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 ZNF778Q96MU6 729 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 AIFM2Q9BRQ8 373 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 TBCCD1Q9NVR7 557 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 KCTD5Q9NXV2 234 aa5.01□□□□□ -1.61
SMCHD1-206ENST00000581631 SREBF1P36956 1147 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 ABCG1P45844 678 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 SCNN1BP51168 640 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 VAV2P52735 878 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 RAP2BP61225 183 aa5□□□□□ -1.61
SMCHD1-206ENST00000581631 FSCN1Q16658 493 aaKnown RBP5□□□□□ -1.61
SMCHD1-206ENST00000581631 RRP12Q5JTH9 1297 aaKnown RBP5□□□□□ -1.61
SMCHD1-206ENST00000581631 AFMIDQ63HM1 303 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms