RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 ST13P5Q8NFI4 369 aaPredicted RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 SLC7A14Q8TBB6 771 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 DEPDC1BQ8WUY9 529 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 TCP11Q8WWU5 503 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 B3GALT6Q96L58 329 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 LSM14BQ9BX40 385 aaKnown RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 BRD9Q9H8M2 597 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 RALYQ9UKM9 306 aaKnown RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 DENND4CQ5VZ89 1909 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 NID2Q14112 1375 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 ATG2BQ96BY7 2078 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 CYP3A7-CYP3A51PA0A087WV96 503 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 CCDC163A0A0D9SF12 145 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 TMEM150BA6NC51 233 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 SLC27A2O14975 620 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 EDIL3O43854 480 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 TSPAN1O60635 241 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 TADA2AO75478 443 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 CHRNB1P11230 501 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 FCARP24071 287 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 CYP3A7P24462 503 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 PTENP60484 403 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 SPIRE1Q08AE8 756 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 TUSC3Q13454 348 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 LRRC32Q14392 662 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 MXD4Q14582 209 aaPredicted RBP11.28□□□□□ -0.6
CHMP6-203ENST00000572525 NECTIN1Q15223 517 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 AASDHQ4L235 1098 aaPredicted RBP11.28□□□□□ -0.6
CHMP6-203ENST00000572525 FERMT3Q86UX7 667 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 CCDC148Q8NFR7 591 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
CHMP6-203ENST00000572525 FAM3CQ92520 227 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 TRMT61BQ9BVS5 477 aaKnown RBP11.28□□□□□ -0.6
CHMP6-203ENST00000572525 EIF2AQ9BY44 585 aaKnown RBP11.28□□□□□ -0.6
CHMP6-203ENST00000572525 NFKBIZQ9BYH8 718 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 PLA2G2FQ9BZM2 168 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 LMAN1LQ9HAT1 526 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 ZFP14Q9HCL3 533 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 RXFP3Q9NSD7 469 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 NDRG2Q9UN36 371 aaKnown RBP11.28□□□□□ -0.6
CHMP6-203ENST00000572525 PCDHGA5Q9Y5G8 931 aa11.28□□□□□ -0.6
CHMP6-203ENST00000572525 ARHGEF37A1IGU5 675 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 GOLGA8AA7E2F4 631 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 GOLGA8BA8MQT2 603 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 TMEM189-UBE2V1I3L0A0 370 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 K7ESF4 209 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 EPN2O95208 641 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 KCNK5O95279 499 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 RHOP08100 348 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 QARSP47897 775 aaKnown RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 SATB1Q01826 763 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 STPG1Q5TH74 334 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 TANGO2Q6ICL3 276 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 WDR5BQ86VZ2 330 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 FAM160A2Q8N612 972 aaPredicted RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 C12orf50Q8NA57 414 aaPredicted RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 RNF149Q8NC42 400 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 LRRC2Q9BYS8 371 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 LSG1Q9H089 658 aaKnown RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 TRPV4Q9HBA0 871 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 ZNF334Q9HCZ1 680 aaPredicted RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 MTRRQ9UBK8 725 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 POLIQ9UNA4 740 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 KIAA1549LQ6ZVL6 1849 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 ADAMTS20P59510 1910 aa11.27□□□□□ -0.61
CHMP6-203ENST00000572525 ZNF638Q14966 1978 aaKnown RBP11.27□□□□□ -0.61
CHMP6-203ENST00000572525 ACACAQ13085 2346 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 MYO16Q9Y6X6 1858 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 CHURC1-FNTBB4DL54 471 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 ZNF197O14709 1029 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 ADAMTS3O15072 1205 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 PRPF3O43395 683 aaKnown RBP11.26□□□□□ -0.61
CHMP6-203ENST00000572525 AKAP3O75969 853 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 IGHDP01880 384 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 SRGAP2CP0DJJ0 459 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 PTPN2P17706 415 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 PSMC3P17980 439 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 FGFR3P22607 806 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 CDC27P30260 824 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 RAP1GAPP47736 663 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 FNTBP49356 437 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
CHMP6-203ENST00000572525 GAS6Q14393 721 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 AMHR2Q16671 573 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 DGKKQ5KSL6 1271 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 PLA2G2CQ5R387 149 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 FAM171A1Q5VUB5 890 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
CHMP6-203ENST00000572525 PLA2G4FQ68DD2 849 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms